Marmota marmota marmota (Alpine marmot): 107160279
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Entry
107160279 CDS
T09644
Name
(RefSeq) medium-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mmma04030
]
107160279
G protein-coupled receptors [BR:
mmma04030
]
Rhodopsin family
Vision
Opsin
107160279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srt
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
107160279
NCBI-ProteinID:
XP_015362435
Ensembl:
ENSMMMG00000010010
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MQGWQASVTGLSTAMAQRWDPQRLAGGQPQDSHEDSTQSSIFTYTNSNATRGPFEGPNYH
IAPRWVYHITSTWMIIVVIASVFTNGLVLVATMKFKKLRHPLNWILVNLAIADLAETVIA
STISVVNQFFGYFVLGHPLCVVEGYTVSVCGITGLWSLAIISWERWLVVCKPFGNVRFDA
KLAIVGIAFSWIWSAVWTAPPIFGWSRYWPYGLKTSCGPDVFSGNSYPGVQSYMMVLMVT
CCIIPLSIIILCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVLAYCLCWGPYAS
FACFATANPGYAFHPLVAAVPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDTSE
LSSASRTEASSVSSVSPA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctggcaggcatcagtgacagggctttccacagccatggcccagcggtgggac
ccccaaaggcttgcaggtgggcagccgcaagacagccatgaggacagcacccagtcgagc
atcttcacctataccaacagcaacgccaccagaggcccctttgaaggccccaattaccac
attgctcccagatgggtgtaccacattaccagcacctggatgatcattgtggttatcgca
tccgtcttcactaatgggcttgtgctggtggccaccatgaagttcaagaagctgcgccac
cctctgaactggatcctggtgaacttggcaatcgctgacctagcagaaaccgtcattgcc
agcaccatcagtgttgtgaaccagttcttcggctacttcgtactgggccaccctctgtgt
gttgtggagggctacactgtctccgtgtgtgggatcacaggcctctggtccctggccatc
atttcctgggagaggtggctggtggtctgcaagccctttggcaatgtgagatttgatgcc
aagctggctattgtgggcattgccttttcctggatctggtctgctgtgtggacagcccca
cccatctttggttggagcaggtactggccctatggcctgaagacatcctgtggcccagac
gtgttcagtggcaactcataccctggggtgcagtcttacatgatggtcctcatggtcacc
tgctgcatcatcccactcagcatcatcattctctgctacctccaagtgtggctggccatc
cgagcagtggcgaagcagcagaaagaatccgagtccacccagaaggctgagaaggaagtg
acgcgcatggtggtggtgatggtccttgcatactgtctctgctgggggccctacgcctcc
tttgcatgctttgctactgccaaccctggctatgccttccaccctctggtggccgccgta
ccagcctactttgccaaaagtgccactatctacaatcctgttatctacgtctttatgaac
aggcagtttagaaactgtatcttgcagctttttggaaagaaggttgatgatacctctgaa
ctctccagcgcctcaagaacagaggcttcatctgtctcttcagtgtctcctgcatga
DBGET
integrated database retrieval system