Marmota marmota marmota (Alpine marmot): 107160706
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Entry
107160706 CDS
T09644
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
107160706
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
Pkinase
LRR_LRWD1
PK_Tyr_Ser-Thr
LRR_At5g56370
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107160706
NCBI-ProteinID:
XP_015362836
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MSGNLGKEKDSKEKDLNVPSVKEREKTSKASGDLGTESHEKEPKTKGKDAKDGKRVSSAA
QPGVAFLVDNTIKRPSPARGTGKKSSNAEVTKELKKCLEENSVRLDLSKRSMHILPSSIK
HLTQLTELYLYSNKLQSLPAEVGCLVNLMILALSENSLTSLPDSLDNMKKVQLLDLRHNK
LKEIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLRTLSMRENKIKQLPAEIGELCNL
IMLDVAHNQLEHVPKEIGNCTHITNLDLQHNELLDLPDTIGNLSHLYRLGLRYNRLSAIP
RSLANCSALEDLNLENNNISALPESLLCSLVKLNNLNLARNYFQSYPVGGPAQFFTICSL
NMEHNQINKIPYGIFSRAKALRKLNMKDNQLTLLPLDFGTWTIMIELNLANNQLRMIPED
LSGLVSLQVLILSNNLLKKLPQGLGNLKKLRELDIEENKLESLPNEIGYLKDLQPENFLV
DQNLATPTIKPADFGDAVQLNMTYYAHQLLGNAEFAAPEIFLGNPVSLTSNMWSVGVLTY
VLLSGVSPFLDDIMEETCLNICRLDFSFPDDYFKGVSKKVKEFVCFLLQEDPSKCPLAAV
DLQEPWLLVGNSNGKGMGVLDTSRLTSLLNCKLQNDVLHIHSIKTFCCAGPCLESNLS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaatttagggaaagaaaaagactctaaagagaaagatctgaatgtgccatca
gtcaaagaaagagaaaagacttcaaaggcttctggagatttggggacagaaagccatgaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaaaagggtctccagtgctgcc
caaccaggggtggcttttttagttgacaatacgatcaagcggccaagtcctgcacgtggg
actgggaaaaaatccagtaatgcagaagtaactaaagagctcaagaagtgcctggaagag
aattcagtgcgtttggacttatccaagaggtctatgcacatattgccatcatcgatcaaa
cacttgactcaattaactgaactttatttatacagtaacaagctgcagtccctcccagca
gaggtgggctgtctagtaaatctcatgatactggctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacatgaagaaggtgcagttgcttgatttacggcataataaa
ctgaaagaaattccttcagtggtgtataggttagattctctcaccactctctaccttcgc
tttaatcgcataactactgtggaaaaggacataaaaaacctgtcaaaactcagaacgctt
agcatgcgagagaacaaaatcaaacaactacctgctgaaattggtgagttatgtaacctc
attatgctggatgtagctcataatcaacttgaacacgttccaaaggagattggaaactgc
acacacataaccaaccttgacttgcagcacaatgaactgctagacctcccagatactata
ggcaacctgtctcatttgtatcgtcttggtctgagatacaatagactctcagcaataccc
agatcactagcaaactgcagtgcacttgaagacttaaatttggagaacaataacatttct
gctttaccagagagccttttatgcagtcttgtgaaactgaacaatttgaacttggctaga
aattacttccagtcatatccagtgggtggtccagctcagtttttcaccatctgttccctc
aacatggaacacaatcaaatcaataaaatcccatatggaattttctctagagcaaaagca
ttaagaaaactaaatatgaaggacaatcagttaacattacttccattggactttggaact
tggaccatcatgatagaattgaatttagccaataatcagctaagaatgatccctgaggat
ttatctggtcttgtttctcttcaggttctaatattatcaaacaatcttctaaagaagctt
ccccaaggtcttggaaaccttaagaagttaagagagttggatatagaggagaacaaatta
gaatccttgccaaatgaaattggttatcttaaagatttacagcctgagaatttcctggtg
gatcagaatttagccacgccaacaattaaaccggctgactttggagatgctgtccagctc
aacatgacctactatgcccaccagttactggggaacgctgagtttgcagcccctgaaatc
tttcttgggaaccctgtctccctgacctccaacatgtggagtgttggagtgctcacatat
gtgcttcttagtggtgtgtcccccttcctggatgacatcatggaagagacgtgcctgaat
atttgccgattagactttagtttcccagatgactactttaaaggagttagcaagaaggtc
aaggagttcgtgtgcttcctcctgcaggaggacccttccaagtgtcccttggctgcagtg
gacctccaggagccctggctactggtgggcaacagcaatggcaaaggcatgggtgtcctc
gacacgtccagactgacttccttattgaactgcaaactccagaatgatgttctacatatt
cacagcattaaaactttctgctgtgcaggcccctgcctagagtctaacctatcttga
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