Candidatus Midichloria mitochondrii: midi_00357
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Entry
midi_00357 CDS
T01561
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmn
Candidatus Midichloria mitochondrii
Pathway
mmn03030
DNA replication
mmn03430
Mismatch repair
mmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
midi_00357 (dnaE)
03430 Mismatch repair
midi_00357 (dnaE)
03440 Homologous recombination
midi_00357 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmn03032
]
midi_00357 (dnaE)
03400 DNA repair and recombination proteins [BR:
mmn03400
]
midi_00357 (dnaE)
Enzymes [BR:
mmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
midi_00357 (dnaE)
DNA replication proteins [BR:
mmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
midi_00357 (dnaE)
DNA repair and recombination proteins [BR:
mmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
midi_00357 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF3536
FAD-SLDH
Motif
Other DBs
NCBI-ProteinID:
AEI88667
UniProt:
F7XVG8
LinkDB
All DBs
Position
329388..332750
Genome browser
AA seq
1120 aa
AA seq
DB search
MTSFIHLRAHSDYSLGKSIIKIPDLINKAKADNMPALCLMDRGNLFGSLEFSMECLKNGI
KPLIGTILKIDLEADTDKREPHSEIALIAKDQDGYQNLLELVSLSFLSYSDSQPHIKISR
LLNYSKGLIALFNSFESPMAALIKKEQYKVAERLLEQFHNSFKENLFLELIRTEKNNWQF
HEHWLLDKAFEKDIPIVATNPISFLRANLSEAHDALLCIANSSYILEDNRERSDPDHYFK
NEEEMRALFSDLPEAIENTKLIALKSSVFSETRKPILPKFSHLIEDETLELQKQAIDGLR
KRLNSVKYNINQQEYFKRLEFELGVINKMQFPGYFLIVSDFIKWSKGNGISVGPGRGSGA
GSIVAWALEITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQERRDEVINYVKDKYGAER
VAQIITFGKLQARAVLRDVGRVMQIPYGLVDKICKMVPNNPANPITLSEAIALDKQLQDM
CDDDPDLEKLLSISLELEGINRHVSTHAAGIIIADRPLIELVPLYMDSNSSMQTIQYSLK
YADAAGLMKFDFLGLKTLTVISQTVQLIEKNRGIRINLANIDFEDKKTYQLLSQGHTVGI
FQLEGAGMREAIKQLKPDFFGDVIALTSLYRPGPMDNIPSYVNRKHGLETPDYIHPSLEN
LLKETYGIIIYQEQVMELAQILAGYSLGEADLLRRAMGKKNKQEMDEQRAIFIERCIANE
IKEQRAAEIFALIEKFASYGFNKSHAAAYAVITYQTAYLKTHYTAEFLTASMNLEIHDTS
KIGMFCNDAKLFGIDILLPNINSSNAYFTVDGDKIRYGLAAIRGVGIKATVDIQEERRTA
QFQNIHQFIERCHNLINKRAMENLIKAGTFDSLYPNRAELFANLKKLIRYSQSNKLEDQS
QGSLFFDEENDQGLSLSAVADWEDRRKLAFEFEALGFYLSAHPLNEYQERLKKLGILSVE
NVLSLEIKNFYKCRVAGVVSSKKVKSSKRGKFAFLQITDTTGILDISIFNEKLLIESNDI
LQEGQTIICDIEIKNDENGTRMVAEKISEIHHTMKSTLCACHIYIKDKISIQEISTKVTD
TGLPIKLYAELDDGSVVHFGLEKPLFIDYKGLEELKKLII
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactagttttatacatttacgcgctcattcagactattccttgggtaagagtattata
aaaatcccagacctcattaataaagccaaggcggataacatgccagctctttgccttatg
gaccggggcaatttatttggttctcttgagtttagtatggagtgtttaaaaaatgggatt
aagcccctgattggcactatactaaaaatagatttagaagccgatacagataaacgggaa
ccgcattctgaaatagctttaattgcaaaagatcaagatggctatcaaaatcttttggag
ttagtcagtttatcttttttaagctattctgactcacagccccatataaaaatttctcgg
cttcttaactattctaaaggactaatcgctttatttaattcatttgaaagccccatggct
gctcttattaaaaaagaacagtataaagtcgctgagcgtttactagaacaatttcataat
agctttaaagaaaatctattcttagaactaattagaactgaaaaaaataattggcaattt
catgagcactggctcctagataaagcatttgaaaaagatattcctatcgttgccactaac
cccatttcatttttaagagctaatttatctgaagcacatgatgctttgctatgtatagca
aacagtagctatatcttagaagataatagagaaagatcagatcccgatcactattttaaa
aacgaagaagaaatgagagctctgttttcagacttaccagaagcaattgaaaacactaag
ttaatagctttaaaatcctctgttttttcagagacaaggaagcctattttaccaaaattt
tcacatctaattgaagatgaaaccttagagctacagaagcaggctatagatggtttaaga
aaaagactcaattcagtaaaatacaatataaatcagcaagaatattttaagcggcttgag
tttgagcttggtgttatcaataaaatgcagttccccggatacttcttaattgtctctgat
tttatcaagtggagcaaagggaatgggatttcagtaggccctggtcggggttcaggagct
ggctctattgttgcatgggcgctggaaatcactgatttagatccaataaaatttggtctt
ctatttgagagatttttgaacccagaaagagtttcgatgcctgattttgatatcgatttc
tgtcaagagcgtcgagatgaggtgattaattatgtaaaagacaagtacggtgcagaaaga
gttgcgcagattattacttttggaaaactacaagctagagctgttttaagagatgttgga
agagtaatgcagatcccttatggtttagtcgataagatttgcaaaatggtgccgaataac
ccggctaatccgatcaccttatcagaagcaatagctctagataagcaattacaagacatg
tgtgatgatgacccagatcttgaaaaacttctttctataagcttagaactagaaggaatt
aacaggcacgtctcaacacacgcagcaggaattataattgccgataggccattgatagag
ttggtgcccctctatatggattctaattcttcaatgcaaaccatacagtattcattaaaa
tacgcagatgcagcaggcttaatgaaatttgactttttgggtctcaaaaccttaaccgtg
atatcacaaacagtccagcttattgaaaaaaaccggggaataaggattaatcttgcaaat
attgattttgaagataaaaaaacctaccaactgctttcacaaggtcatactgttggaata
ttccagcttgagggcgctggaatgagagaggcaataaaacaactcaagcccgattttttt
ggcgacgttatagcacttacctcattatacaggccaggacctatggacaatatcccaagt
tatgtcaacaggaaacatggcctcgaaactccagattatatacacccaagcttagaaaat
cttcttaaagaaacatatggaattattatctatcaagagcaagttatggagcttgcccaa
atacttgctggatacagtcttggtgaagccgaccttttaagaagagcaatgggtaaaaaa
aataagcaagaaatggatgaacaacgagctatttttattgaaagatgcatcgctaacgaa
ataaaagaacaaagagctgctgaaatatttgccttgatagagaaatttgcaagttacggc
tttaataagtcacatgcggctgcatatgcagttatcacttaccaaactgcgtatctaaaa
acccattatactgccgaattcttaactgcttcaatgaacttagagatccatgatacaagt
aaaataggcatgttttgtaacgatgcgaaactgtttggtatagatatattacttcctaat
atcaatagctccaatgcatattttacagtagacggagataaaatccgttatggcttagca
gccatcaggggtgtaggaatcaaagcaacggtagacatacaagaagaaagaagaactgca
caatttcagaatatacaccaattcatcgaaaggtgccataatcttatcaacaagcgcgct
atggaaaatttgataaaggcaggcacatttgattcactttatcctaatagagctgaacta
tttgcaaacttaaaaaaattaataagatattctcaatcaaacaaacttgaagatcaatct
caaggctctttattctttgacgaagaaaatgaccaaggcctttctttaagtgcagttgct
gattgggaagatagaagaaaactggcttttgaatttgaagcacttggcttttatctttcg
gctcacccattaaacgagtaccaagaaaggttgaaaaaactaggaattctaagtgtggaa
aacgtcctcagtttagaaataaaaaacttctacaaatgtagagttgcaggcgttgtttct
tctaaaaaagttaaatcctcaaagcgtggaaaatttgcttttctacaaataacagataca
acaggtattctagatatatcgatattcaatgaaaaacttctcatagaaagcaatgatata
ctacaagaaggacaaacaattatatgcgatattgaaatcaaaaacgatgaaaacggcact
agaatggttgctgaaaaaatttcagagatacatcatacgatgaaaagcactctctgtgct
tgtcatatctatattaaggataaaatctctatccaagagatcagtactaaagttacagat
actgggctacccataaagttatatgcggaattggatgatggaagcgtggtacattttggt
ttagagaaaccgttatttatagattacaaaggattggaagaactaaaaaaattgataata
taa
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