Candidatus Midichloria mitochondrii: midi_00901
Help
Entry
midi_00901 CDS
T01561
Symbol
pcnB
Name
(GenBank) polyApolymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mmn
Candidatus Midichloria mitochondrii
Pathway
mmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
midi_00901 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmn03019
]
midi_00901 (pcnB)
Enzymes [BR:
mmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
midi_00901 (pcnB)
Messenger RNA biogenesis [BR:
mmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
midi_00901 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEI89185
UniProt:
F7XWY6
LinkDB
All DBs
Position
complement(847021..848223)
Genome browser
AA seq
400 aa
AA seq
DB search
MSTIKIHINTISILKELLCLYNLLQAHGDVKLVGGCVRDMLLGLAPKDIDLATTILPQEV
MRILSLNQIKCIPTGLEFGTVTAVVNHITFEITTLRKDIKTYGRKAEVEFTDEWLEDAKR
RDFTVNAMYASIDGTVMDFFNGIEDLKNKKIKFIGNAEQRIKEDFLRILRYFRFISYIGG
NSIDENSLMAAIKLKSGLEKISGERIKTEMFKLLSNPFAKKSIRLFEKTGIDQYVGMPEI
YNLPELNFIIGNATVNLTLILKALKISAVELNGLFKRWRLSTLEKKELAFLREYQYPWPL
NAEIKLHQREFYRLGAYFKNAILVKASTEEQYTLAEEFILASTTWRYPDFPLKGEDLIKL
GAIGPKIGQIKNLLLETWIENDFLYDKDELLDIATKISLK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcactataaaaattcatataaataccatctctatattaaaagaattattatgttta
tataatttattgcaagctcacggtgacgttaagttagtaggaggttgcgtaagagatatg
cttctaggcttagctcctaaagatatcgatcttgctacaacaattttgcctcaagaagta
atgaggattttatccctaaatcaaatcaaatgcatccctacaggccttgaatttggaacg
gttactgcagtagttaatcatattactttcgagattactactcttagaaaagatatcaag
acctatggcagaaaagcagaagttgagtttacagatgaatggctagaagacgctaaaagg
agagacttcactgtcaacgcaatgtacgcttcaattgatggaacagtgatggattttttt
aatggcattgaagatttaaagaataaaaaaataaaatttataggcaatgcggagcaacgt
atcaaagaagattttttaagaatattaagatactttaggtttatctcctatataggtgga
aacagtatagatgaaaatagtttaatggctgctattaagctaaaaagtggtttagaaaag
atatcaggagagagaattaaaactgaaatgtttaaactactcagcaacccatttgctaaa
aaaagtattcggttatttgaaaaaacaggaatagatcaatatgtaggtatgcctgaaata
tataaccttccggaattaaactttatcataggtaatgctacagttaatttaactctaatt
ttaaaagcgttaaaaatttctgcagtagaattaaacggattatttaaaagatggagatta
tcaacacttgagaaaaaggaattagctttcctaagagagtaccagtatccatggccgtta
aatgctgaaattaaacttcaccaaagagaattttatagactgggcgcttactttaaaaat
gcaattttagttaaagcaagcactgaagagcagtatacactggcagaagagtttatctta
gcttctactacttggcgttatccagacttcccgctgaagggagaagatcttataaagctt
ggcgctattggccctaaaatcggtcaaataaagaaccttcttttagaaacttggattgag
aacgattttttgtatgataaagatgagctattagacattgccactaaaataagtttaaaa
taa
DBGET
integrated database retrieval system
