Candidatus Midichloria mitochondrii: midi_01015
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Entry
midi_01015 CDS
T01561
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmn
Candidatus Midichloria mitochondrii
Brite
KEGG Orthology (KO) [BR:
mmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmn03016
]
midi_01015 (rnd)
Enzymes [BR:
mmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
midi_01015 (rnd)
Transfer RNA biogenesis [BR:
mmn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
midi_01015 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEI89294
UniProt:
F7XTT5
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All DBs
Position
complement(959369..959983)
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AA seq
204 aa
AA seq
DB search
MQFFYHKYDLPKDVEFPDDIAIDCEAMGLNILRDRLCVVQISAGNGTAHLVHFPSAEYAA
PNLKKVLSNEKTVKIFHFARFDLAIINHYLSIKLKNIYCTKIASRLSRTYTDAHSLRELC
SELLEVKISKQQQCSDWGSKELTQQQIEYAGSDVLYLHSLRRALNEMLVRENRKDLAQQC
FDFLPTRAVLDLLGWNGADIFAHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttttttaccataagtacgatttacctaaagatgttgaatttccagatgatata
gcaattgattgtgaagctatggggttaaatattttaagagacaggctatgtgtagtacaa
atcagcgctggtaatggtacggcccatctagtacattttccttctgcagaatatgcagct
ccaaatctaaaaaaagtattaagcaatgaaaaaacggtcaaaatatttcattttgcgcga
tttgatttagctataataaatcactaccttagcatcaaattaaagaacatatattgcacc
aaaattgcctcaagattaagcagaacttatactgatgcgcatagtctaagagaactttgt
agcgaactccttgaggttaaaatttctaagcagcagcaatgttctgactgggggtctaaa
gaattaactcaacaacaaatagagtatgctggatcagatgttttgtatttgcattctcta
cgcagagctcttaatgaaatgcttgtaagagaaaatagaaaggatttagcgcaacagtgc
tttgattttttaccaactagagcagtgcttgatcttcttggttggaacggggcagatata
tttgctcatcactag
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