Mesomycoplasma moatsii: V5E84_03300
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Entry
V5E84_03300 CDS
T10790
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mmoa Mesomycoplasma moatsii
Pathway
mmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V5E84_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmoa03019
]
V5E84_03300
Messenger RNA biogenesis [BR:
mmoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V5E84_03300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
TssR_M
Motif
Other DBs
NCBI-ProteinID:
XLO82846
LinkDB
All DBs
Position
703468..705189
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AA seq
573 aa
AA seq
DB search
MNNQATRFFGLGGFQEIGKSTCVIEHDDQIFIVDAGIQFANGSLTGIKGIIPDYQYLIDN
QKKIQGLFLTHGHEDHMGGIVYLVQNCDIKRIVAPPVGIQYLKFKFEERKIKTSSIEWIE
INKDLVLNFGDMKVDFWSAQHSIPDAFGIRFSNRNGSMLFTGDFRIDYTPIGSYTDFDKL
KKIGEENLTVLFSDSTNAMRPYHSPSEKDILKAIREYMEQAPKKIIITVFASNMSRICAI
IKIAQEMNKKVIAFGRSMVNGINIARQLGHIDVDDSVFIDKKQISKYDDNELLILTTGSQ
GEPLAGLAKMAEGKHPHVTIKHNDLIIFSSSPIPGNRIKIELLINDLYKLGANIKENKID
GYLHTSGHAYQEEHKKIFELTKPTYFFPYHGEFRMSVVHGQTAIKSGVDPNNVIIAKHGE
VYEMLNHKIYKTNKVIESSPIYIDGEIASVKNTKLINEREQLGENGFVYVSMLIDKEKNE
IVGRAKIITRGTIYVKSSTDIISEIRKLVHGAVLYKIKNSDDWTSAKLKKLIQERVKPYF
YKTKRRSPYVVVSIQYVDNLKYLEDKNVNEVNA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaagccacaagattttttggtttaggtggttttcaagaaataggaaaatct
acttgtgtcattgaacatgatgatcaaatctttattgtagatgcaggaattcaatttgct
aatggttctttaacaggaattaaaggtattattcctgattaccaatacttaattgataat
caaaaaaaaatccaaggcctttttttaactcatggtcacgaagaccatatgggtggaatt
gtttatttagtacaaaattgtgatatcaaaagaatagttgctcctccagtaggcattcag
tatttaaaatttaaatttgaagaaagaaaaattaaaacatctagtatagaatgaattgaa
attaacaaagatttagttttgaattttggagatatgaaagtcgatttttgatcagctcaa
cattcgataccagatgcttttggaataagattttctaatcgcaatggatcaatgcttttt
acaggtgattttagaattgactatacaccaataggttcttatactgattttgataaatta
aaaaaaattggtgaagaaaatcttacagttcttttttcagattcaactaatgctatgaga
ccttatcattcacctagtgaaaaagatattttaaaagcaattagagaatatatggaacaa
gcacctaaaaaaatcattattactgtatttgcttcaaatatgtctagaatttgcgcaatc
attaaaattgcacaagaaatgaataaaaaagttattgcttttggtcgttcaatggtgaat
ggtattaatattgctagacaattaggacatattgatgttgatgattctgtttttattgac
aaaaaacaaatatcaaaatatgatgataatgaattattgattttaaccacaggctctcaa
ggcgaaccacttgctggattagcaaaaatggcagaagggaaacatccacatgttaccatt
aaacataatgatttaattatattttcatcttcacctataccaggaaatcgaataaaaata
gaattattaatcaacgatttatacaaactaggagcaaatattaaagaaaataaaattgat
ggatatctacatacttcaggacacgcttatcaagaagaacataaaaaaatttttgaatta
acaaaaccaacttatttttttccatatcacggagaatttagaatgtctgttgtacatgga
caaacagcaattaaatcgggtgttgatccaaacaacgttattattgcaaaacatggtgaa
gtttatgagatgttaaatcataaaatttataaaactaataaagtaattgaatcaagtcca
atttatattgatggcgaaattgcttcagttaaaaatactaagttaattaatgaaagagaa
caacttggagagaatggttttgtctatgtttctatgcttatagataaagaaaaaaatgaa
attgttggtcgagcaaaaataattacaagaggaacaatatatgttaagtcttcgacagat
attatttctgaaattagaaaattagttcacggagctgttctatacaaaattaaaaactct
gatgattgaacatcagcaaaattaaaaaaactaattcaagaaagagtaaaaccttacttt
tataaaactaaaagaagaagtccatacgttgtagtttctattcaatatgttgacaatctt
aaatacttagaagataaaaatgtaaatgaagttaatgcttaa
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