Candidatus Methylospira mobilis: F6R98_03560
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Entry
F6R98_03560 CDS
T06248
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mmob
Candidatus Methylospira mobilis
Pathway
mmob00541
Biosynthesis of various nucleotide sugars
mmob01100
Metabolic pathways
mmob01250
Biosynthesis of nucleotide sugars
Module
mmob_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F6R98_03560 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mmob01005
]
F6R98_03560 (rfaD)
Enzymes [BR:
mmob01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
F6R98_03560 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mmob01005
]
Core region
F6R98_03560 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QFY41819
UniProt:
A0A5Q0BE64
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All DBs
Position
complement(848796..849767)
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AA seq
323 aa
AA seq
DB search
MIVITGGGGMIGSMVAWRLNVLGRDDLVIVDSMTHPEQWQNLCHRRYANYFDKNELPSWL
EHATGEVNAIVHMGAISATTEQDWGRLLDHNIRHSQFLWSWCADRGVPFFYASSAATYGS
GDQGYDDASIENLRPLNAYGYSKHFFDQWVMRQVEAGYAPPQWAGFKFFNVYGPNEYHKQ
RMASVAFHSFNQFRDNGTVKLFRSRREGIADGMQSRDFIHVKDAAAVLCWFIEHERVSGI
YNIGTGQARSFLDLATAVMTGTGREPHITWIDMPEDLEGKYQYFTEARIDRLRAAGYTDP
FLPLEDGVRDYVQNYLMQPDPYC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaattaccggcggtggaggcatgataggcagcatggtcgcgtggcggctcaac
gtccttggacgcgacgatctggtgatcgtagacagcatgacgcaccccgaacaatggcag
aatttgtgccacaggcgctacgccaactatttcgataaaaatgaattacccagctggctg
gaacacgccaccggcgaggtcaacgcgattgtgcatatgggcgcgatcagcgctactacc
gaacaggactggggccgcttactggatcacaatatccgccattcgcaatttctgtggagc
tggtgcgccgatagaggcgtgccattcttctacgccagttcggctgcaacctacggttca
ggcgaccagggatacgacgatgcatctatcgaaaatctgcgtccgctcaatgcctatggc
tattccaagcattttttcgatcaatgggtcatgcggcaggtcgaggccggatacgcccct
ccgcaatgggccggtttcaagtttttcaatgtctatggccccaacgaatatcacaagcag
cgcatggccagcgtggcattccacagcttcaaccagtttcgcgataatggcacggtcaag
cttttccgcagccggcgcgaggggatagccgacggaatgcaaagccgcgatttcatccac
gtcaaggatgctgcggcggtattatgctggtttatcgaacacgagcgggtttccgggatt
tataatatcggcaccggacaggcgcgcagctttctcgatctggccacagcggtcatgacc
ggcacggggcgtgagccgcatattacctggatagatatgccggaggatctggaaggcaag
tatcaatattttaccgaagcgcgcattgatcgcctgcgcgcggcgggatataccgatccg
ttcctgcccctggaagatggggtgcgtgattatgtgcaaaactacctgatgcaaccggac
ccctattgctga
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