Candidatus Methylospira mobilis: F6R98_11775
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Entry
F6R98_11775 CDS
T06248
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mmob
Candidatus Methylospira mobilis
Pathway
mmob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F6R98_11775 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmob03400
]
F6R98_11775 (recB)
Enzymes [BR:
mmob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F6R98_11775 (recB)
DNA repair and recombination proteins [BR:
mmob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F6R98_11775 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
Baculo_Ac102
Motif
Other DBs
NCBI-ProteinID:
QFY43214
UniProt:
A0A5Q0BLX0
LinkDB
All DBs
Position
complement(2620807..2624508)
Genome browser
AA seq
1233 aa
AA seq
DB search
MNHLSINPPDNRQKLNPLDFPLLGTRLIEASAGTGKTWIIAALYIRLVLGHGSENARFDR
ALLPPDILVVTFTEAATRELRDRIRARLTQAAACFRGREEGDEFLRGVKSSYAETQWPGC
ARLLEISALWMDEAAVYTIHGWCNRMLQQHAFDSGSLFKQEVNTSDLELLNEVVRDYWRT
FFYTLSEAEARAVVKIAASPQALSATVKPLLELTEVKGLETAATDPRELFAAWAAWDDAR
NALERQAQQTWRNAQAEIEALLRAASEQGWLHGNSYRKNTFEQRLNDFAGWAGGGARPKA
EWFGRFAQTRFGMNARHKDKLPQHAAFVAVDTLLQCESEEPDFTREVIVHAALWVRERYS
REKQRRARMDFNDMLTRLDRTLQSDSGEQLAAVIRKQYPVALIDEFQDTDPLQYRIFKRI
YQPDSCCQGLGCLLIGDPKQAIYSFRGADIHTYLQAHADTAGRHYTLDTNFRSTAGLVAA
VNRIFQHAEHRDKGAFLFKNAAANPVAFHPVAAQGVDQALIVNGKAVAPMTFLHWGADQE
KPVSSTAYRQYMAQAAATDMVRLLNLSARGGAGFSGKTGIQPLKPSAIAILVRTRKEAKA
MQAALAQRQLRSVYLSEGDSVFNSREALDLLFWLKAAAEPRDERKVRAALATATLDLSLP
ELEVLNCDESAWERQLERFRQYQLRWQKDGVLPMIRSLLSDYRVSSRLMNSSADSGGERS
LTNLLHLAELLQKTAAHLDGEQALIRYLAEAMAAAQADGGLSSDEATIRLESDAELIKII
TIHKSKGLEYPLVFLPFIASFREVTAQYSSYYRYHDDDDALRVDLSRDETARAKNDFERL
QEDMRLLYVALTRAKHQCRLGVAPLKNMQNSALGYLLGWEKDAAPSNLPKQLGVLAGGSG
VIAVDAAPEPDNTPYNASTCAVGAGAPAVRTATANIPDAWWIASYSALRLEAETDANERG
VDAAETAHDDKWLDESASDTVENRSLDALTLARTGIHALPRGAEPGTAIHELMETSARQG
FREPTGKELEKFCRGIGWESWTDILRKSLADWLHMPLLADAAISLSGLQRHAYQPELEFL
LPVHGLDLRQLDALVTRHTFDGRARPRLQHTILKGMLKGYIDLVFEHDNRFYVVDYKFNA
LGDSDAAYNREELENVMLQKRYDLQYVIYLLALHRQLKARMGATYNYDTHIGGALYLFLR
GSSGPRQGRVCDCPPKTLIEALDVMLTGRACPA
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatctatcaataaatcctcccgacaaccgtcaaaaactgaacccgctggatttt
cccttattgggtacgcgtttgatcgaagccagcgccggcaccggcaagacctggattatt
gccgcgttgtatatccgtctggtgctgggacacggcagcgaaaatgcgcgtttcgatcgg
gcgctgctgcctcccgatatcctggtggtcaccttcaccgaagccgcgacgcgggagctg
cgcgatcgcatacgcgcgcgtttgacgcaggccgctgcctgtttccggggcagggaagag
ggggatgagtttctgcgaggcgttaaaagcagctacgccgaaacgcaatggccgggctgc
gcgcggctgctggaaatctctgcgctgtggatggacgaggccgctgtttacaccatacac
ggctggtgcaaccgcatgttgcaacaacacgcgttcgacagcggcagtttgttcaaacag
gaggtgaatacctcagacctggaactgctcaacgaagtggtgcgcgattactggcgaact
ttcttttatacgctgagcgaggcggaagcgcgcgcggtggttaagatagccgcgtcgccg
caggctttgagcgctacggtcaaaccgttgcttgagttaaccgaggtcaaagggctggaa
actgcggcaaccgatccgcgcgagctgtttgcggcgtgggcggcatgggatgatgcgcgc
aatgcgctggagcggcaggcgcagcaaacctggcgcaatgcgcaggccgagattgaggca
ttgttgcgcgcagcatcggagcagggctggctgcacggcaacagctatcgtaaaaatacc
ttcgaacagcgtctgaacgattttgccggctgggcgggcggcggagcgcgtcccaaagcg
gagtggtttggccgtttcgcgcagacccggttcggcatgaacgccagacataaggataaa
ctgccgcaacacgccgcttttgttgcggttgatacgctattgcagtgtgaatccgaagaa
cctgacttcacgcgcgaggtgatcgtgcatgcggccctctgggtgcgcgaacgttacagc
cgcgaaaaacagcgccgcgcacgcatggatttcaacgacatgctgacgcgtctcgatcga
accttgcagagcgatagcggcgaacagctggctgcggtcatacgcaagcaatatccggtt
gcgctgatcgacgagttccaggacaccgacccgttgcaataccgtattttcaagcgcatt
tatcagccggattcttgttgtcaggggttgggctgcttgctgatcggcgatcccaagcag
gcgatttactcttttcgcggcgccgatatacatacctatttgcaggctcacgccgataca
gccgggcgtcattacacgctggacaccaattttcgttcgacggccggtctggtggcggcg
gtcaaccggattttccagcacgcggaacacagggataagggggcgtttctgtttaaaaat
gcggcggcaaacccggttgcgtttcatcccgtagcggcgcaaggcgtcgatcaggcgttg
atcgtcaacgggaaagccgttgccccgatgactttcctgcattggggcgcggatcaggaa
aagccggtcagttcgacggcgtaccgccagtacatggcgcaggcggccgcgacggatatg
gtgcgtttgttgaatctgtccgcccgtggcggggctgggtttagcggcaaaacgggtatt
cagcccttgaaaccctccgctatcgcgattctggtcagaacgcgcaaggaagccaaagcc
atgcaggccgcgctggcgcaacggcaattgcgcagcgtttacctgtccgaaggcgattcg
gtattcaacagccgcgaagcgctcgatttgttgttttggctgaaggcggctgccgaaccc
cgggatgagcgcaaggtgcgcgcggcgctggccaccgcgacgctggatttatcgctgccg
gaactggaggtgctgaattgcgacgagtcggcctgggaacgacaattggagcgcttccgc
caatatcagttgcgctggcaaaaagacggcgtgctgccgatgatccgcagtctgttgagc
gattaccgggtcagttcgcgtttgatgaattcatccgccgatagcggcggcgagcgcagc
ctgaccaatctgctgcatctggccgagctgctgcaaaaaacggcggcgcacctcgacggc
gagcaggctttaatacgctatcttgccgaggcaatggccgctgcgcaagccgatggcggc
ctgtcgtcggatgaggcgacgatccgcttggaaagcgatgcggagctgataaaaatcatt
accatacataaatccaaaggactggaatatccgctggtatttcttccatttatcgcgtcg
ttccgcgaagtgaccgctcaatacagcagctattaccgctaccacgacgacgatgacgcg
ctcagggtcgatctgagccgggacgagactgcaagagcaaaaaacgatttcgagcgcctg
caggaggatatgcgtttgctttacgtcgcattgacgcgcgccaaacatcagtgccggctg
ggcgttgcgccgctaaaaaacatgcaaaacagcgcattgggctacttgctgggatgggaa
aaggatgccgcgccgtcaaatctgccgaaacaactcggcgtgctggccggcggctccggc
gttatcgccgtagatgcggcgccagagccggacaatacgccttataacgcatccacctgc
gccgttggcgccggcgcgccggcggttcgcaccgcaacggcgaatattcccgatgcctgg
tggatagccagttatagcgcattgcgcctggaggcggagactgatgcgaacgagagggga
gtggatgccgctgaaaccgcgcacgatgataaatggctggatgaatcggcatccgatacc
gtcgaaaaccggtcccttgatgccctgacgttggcgcgcaccggcattcatgccttgccg
cgcggcgcagagccgggaacggcgatacatgagttgatggaaaccagcgcgcgccagggt
tttcgcgagccgacgggcaaagagctggaaaaattctgtcgcggcataggctgggagtcg
tggacggatatcttgcgcaaatcgctcgccgactggctgcatatgccgttgctggcggat
gcggcaatttccctgagcggattgcagcgccacgcctatcaacctgaactggagtttctt
ctgccggtgcacggtttggatttacgtcaactcgatgcgctggttacgcgccataccttt
gacgggagggcgcgtccgcgcctgcagcacactattttgaaagggatgctgaaaggttac
atcgacctggttttcgagcatgacaaccgcttttacgtcgtcgattacaagttcaatgcg
ctgggtgacagcgatgcggcttacaaccgcgaggagctggaaaacgtgatgctgcaaaag
cgctacgatctgcaatacgtgatttacctgctggcgctgcacagacagttaaaagcgcgc
atgggcgcgacttacaattacgatacccacatcggcggcgcgctgtatttgtttctgcgc
ggcagcagtgggccgcgccagggtcgtgtgtgcgattgcccgccgaaaacgttgatcgaa
gcgctggacgttatgcttaccggtcgcgcatgcccggcatag
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