Candidatus Methylospira mobilis: F6R98_12650
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Entry
F6R98_12650 CDS
T06248
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmob
Candidatus Methylospira mobilis
Pathway
mmob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F6R98_12650 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmob03019
]
F6R98_12650 (pnp)
03016 Transfer RNA biogenesis [BR:
mmob03016
]
F6R98_12650 (pnp)
Enzymes [BR:
mmob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F6R98_12650 (pnp)
Messenger RNA biogenesis [BR:
mmob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F6R98_12650 (pnp)
Transfer RNA biogenesis [BR:
mmob03016
]
Prokaryotic type
tRNA degradation factors
F6R98_12650 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
S1_2
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QFY43360
UniProt:
A0A5Q0BHQ9
LinkDB
All DBs
Position
2802100..2804178
Genome browser
AA seq
692 aa
AA seq
DB search
MKPIRKEFNFGNRLVSFETGEIARQADAAVMVDMEGTVVLVTAVGVKDNSKDSDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEKETLTARLIDRPIRPLFPEGFVNEVQIVATVMSLN
PEIDPDIPSLLGASAALSLSGMPFQGPVSAARVGYRDGQYLLNPGKFELETSELDLVVAG
TEKAVLMVESEAKILSEEIMLGAVIYGHEQSRVAIQAINELVAEAGVTPWSWTPPVADEA
LNQALVAAAKESLVAAYHIPEKQLRQKALKEARAAAVAALTSSEQYSEKAVKAALEALEY
RTVRHSILTEGKRIDGRDMKTVRPISIRTGVLPRTHGSALFTRGETQALVIATLGTGRDA
QLIDAIDGEYKDNFMFHYNFPPYCVGEVGMVGSPKRREIGHGRLAKRGVQAIMPSQDEFP
YVVRVVSEITESNGSSSMASVCGSSLALMDAGVPTKTPVAGIAMGLIKENDSFAILSDIM
GDEDHLGDMDFKVAGSRNGITALQMDIKIDGITSEIMRVALDQAREGRLHILSKMDEALA
TPRQEMSDFAPRIVTFTIDPSKIREVIGKGGATIRAITEETGASIDISDDGIIKVASVDR
QAGAEARRRIEDIIAEVEVGKIYEGKVVRLMDFGAFVTILPGKDGLVHISQISDDHVEKV
SDKLTEGDIVRVKVLEIDRQGRVRLSMKSVDL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctatccggaaagaatttaacttcggtaaccgccttgtaagctttgaaactggt
gaaattgcccgtcaggctgacgcagcagtgatggtggacatggaaggaaccgtggtactt
gtaactgcggtaggcgtcaaggataacagcaaggatagcgatttctttccgctcacggtc
aactatcaggaaaaagcctacgccgcaggaaaaatacccggcggttttttcaaaagggaa
ggacgccccagcgaaaaggaaaccctgaccgccagattgatagaccgccccattcgcccc
ctattccctgaaggtttcgtcaacgaagtacagatcgtcgcgactgtcatgtcgctgaat
cctgaaatagatccggacattccctcattgttgggcgcatcagcggcattatcgttatcg
ggcatgccctttcaaggtcctgtaagcgcggctcgcgtcggttaccgcgatggtcagtac
ctgctcaatccaggcaaattcgaactggaaacttcggagctggatctggttgtcgccggc
acggaaaaagcggtactgatggttgaatcggaagcgaagatactatccgaagagatcatg
ctgggagcggtgatttatggtcacgagcagtcgcgcgtagccattcaggcgatcaacgaa
ctggttgccgaagccggcgtaacgccatggagttggacgccgcccgtcgcagacgaagcg
cttaatcaggctctggtcgctgcggcgaaagaaagccttgtggcggcataccacatacct
gaaaagcaactacggcaaaaagcactgaaggaagcgcgcgcggcggcggttgcagcactg
acttcaagtgaacaatatagcgaaaaagcggtaaaggcagcactggaagctctggaatac
cgtaccgtcagacacagcatattgaccgaaggtaaacgcatagacggcagagacatgaag
actgttcgcccgatcagcatacgcaccggcgtacttcccagaacccacggctcagcgctg
tttacacgcggtgaaacccaggccctggtcatagcgacgctgggtaccggccgcgatgcg
caattgatcgacgcgattgacggcgagtacaaagataacttcatgttccattacaacttt
cctccatactgtgtcggagaagtcggcatggtgggctcgccgaaacgcagggaaattggt
catggccgtcttgccaagcgcggcgtacaagccattatgcccagtcaggatgaatttcct
tacgtagtccgcgtggtttctgaaattaccgaatctaatggttcgagttcaatggcttca
gtatgcggcagcagtctggcgctgatggacgcgggcgtaccgaccaagacgccggtagcc
ggtattgcaatgggtctcatcaaggaaaatgacagcttcgccattctcagcgacatcatg
ggcgacgaagatcatctaggtgatatggatttcaaggtcgccggcagccgtaacggtatc
accgccctgcaaatggatatcaagatcgacggcattaccagcgagatcatgcgcgttgcg
ctggatcaggctcgcgaaggccgtctgcatatcctgtcgaaaatggatgaagcattggcg
actccgcgccaggaaatgtcggactttgcgcctcgtatcgttaccttcaccatagacccg
agcaaaattcgcgaagttatcggcaaaggcggcgctaccattcgcgccattacagaagag
accggcgccagcattgatattagtgatgacggtattatcaaggtagcttcggttgaccgg
caagccggcgctgaagcgcgccgccgcatcgaagatatcattgcggaagtcgaggtcggc
aagatttacgaagggaaagtcgtacgcttaatggacttcggcgcctttgtaaccatactg
ccgggcaaggacggtttggttcacatctcgcaaatatcggacgaccatgttgaaaaagtc
agcgacaaactgacggaaggcgacatcgtacgcgtcaaagtactggaaattgatcgtcag
gggcgtgtacgtctgagcatgaaatcggtcgatttataa
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