Candidatus Methylospira mobilis: F6R98_13375
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Entry
F6R98_13375 CDS
T06248
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mmob
Candidatus Methylospira mobilis
Pathway
mmob00300
Lysine biosynthesis
mmob00470
D-Amino acid metabolism
mmob01100
Metabolic pathways
mmob01110
Biosynthesis of secondary metabolites
mmob01120
Microbial metabolism in diverse environments
mmob01230
Biosynthesis of amino acids
Module
mmob_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F6R98_13375 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F6R98_13375 (dapF)
Enzymes [BR:
mmob01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
F6R98_13375 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QFY43487
UniProt:
A0A5Q0BN10
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All DBs
Position
complement(2952191..2953018)
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AA seq
275 aa
AA seq
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MLQFVKMHGLGNDFVVIDAINQQVNLGEADVRRIADRHFGVGCDQLLLVEKPEGRDADFR
YRIFNADGSEVAQCGNGARCFARFVREQGLTAKTEIRVETRSGHLLLRHEADGLVTVDMG
VPRHAPAEIPLLAEREAARYPVEVDGQALVFGAASIGNPHAVLLVDNSETAPVEKLGALL
ERHDLFPERANIGFMQVLDRQSVRLRVFERGVGETLACGSGACAAVVVGNEWGLLDDKVR
VALPGGELLIRWSGRDQPVLMSGPAVTVFNGSLLL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcagtttgtgaaaatgcacggtctgggcaatgattttgtcgtgatcgacgctatt
aatcagcaggtaaatcttggcgaagccgacgtcaggcgcattgcggaccgtcacttcggc
gtcggttgcgatcagctgctgctggtggaaaagccggagggccgcgacgccgacttccgt
tatcgcattttcaatgcggatggttccgaggtggcgcagtgcggtaacggcgcgcgttgt
ttcgcgcgtttcgtgcgtgagcaaggcttgaccgctaaaactgaaatacgcgtggagaca
aggagcgggcatcttttattgcgtcacgaagcggacgggctggtaacggtcgacatgggc
gttccgcgtcacgcgcccgccgaaatcccgttattggcggagcgtgaggcggccagatac
cctgtcgaagttgacggtcaggccctcgtgttcggggcggcttcgatcggtaatccgcat
gccgtgctgctggttgacaacagcgaaaccgctccagtggagaagctgggcgctttgctg
gagcgccatgacttgtttcccgagcgcgccaatatcggtttcatgcaggtgttggaccgc
caatcggttcgtttgcgtgttttcgagcggggcgttggagaaacgcttgcttgcggcagc
ggagcgtgtgcggccgtcgtagtcggcaatgagtggggattgctggatgacaaggttcgc
gtggctttgccgggcggcgagctattgatccgctggtccgggcgcgatcagcccgtgttg
atgtcgggacccgcggttactgtttttaatggaagtctattgttatga
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