Candidatus Methylospira mobilis: F6R98_14165
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Entry
F6R98_14165 CDS
T06248
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmob
Candidatus Methylospira mobilis
Pathway
mmob03030
DNA replication
mmob03430
Mismatch repair
mmob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F6R98_14165 (dnaE)
03430 Mismatch repair
F6R98_14165 (dnaE)
03440 Homologous recombination
F6R98_14165 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmob03032
]
F6R98_14165 (dnaE)
03400 DNA repair and recombination proteins [BR:
mmob03400
]
F6R98_14165 (dnaE)
Enzymes [BR:
mmob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F6R98_14165 (dnaE)
DNA replication proteins [BR:
mmob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F6R98_14165 (dnaE)
DNA repair and recombination proteins [BR:
mmob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F6R98_14165 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QFY43625
UniProt:
A0A5Q0BIB5
LinkDB
All DBs
Position
complement(3143540..3147031)
Genome browser
AA seq
1163 aa
AA seq
DB search
MPHKFIHLRLHTEYSLVDGIVRIKPLIKQVAALGMPAVAVTDQSNMFSLVKFYKAAMGAG
IKPIAGSDVWFFNPQEPARPHRLTLLVQNEQGYRNLTALVSRSYQENQHQGVPMLMTEWL
NDCNQGLIALSGAREGRIGQALLADNADEARRELEHWLPLFENRFYLELQRTGRPGEEIY
LDAALDLAVEFDVPPVATNDVRFLKAEEFDAHEARVCIHQGRVLDDARRPRDYSEQQYLR
SADEMCELFADIPEALQNTVEIAKRCNLSLTLGKSYLPDFPVPPEMTLEDFFSDESRKGL
EQRMRILFPDSAAHPEKYQRYYDRLEIELGVIKQMGFPGYFLIVADFIQWAKNNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMERRDEVIDYVSR
HYGRDRVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDRIAKLIPFELNMTLDKALNDSED
LARVYEQDDEVRALIDLAKSLEGITRNAGKHAGGVVIAPSQLIDFSPLYCEQGGDNLVTQ
FDKDDVEAVGLVKFDFLGLRTLTIIDWAVEAINRRRANAGETPVDINLIPRDDPESYSLL
KRCATTAVFQLESRGMKDLIRRLQPDCFEDIIALVALFRPGPLQSGMVDDFINRKQGRAK
VEYPHASLENILKPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKAEEMAQQRA
IFVSGSIGRQVEETTASYIFDLMEKFAEYGFNKSHSAAYALVAYQTAWLKAHYPSEFMAA
VLSADMDNTDKVVVLIEECREMKLEIVPPDINSSNYRFVARDSNSIVYGLGALKGVGENA
IEDIIRQRDAQGPYANLFDFCRRIDLRKVNRRVLEALIHAGAMDSFDGNRARHIAELPDA
LKAAEQHGKMAETGQHDLFGLMLDEPECPVNLPQIQIEPWSEEQRLSNEKAILGLYLTGH
PITQYEAELAHMTTAKLGKLYVEENRGFGRNSETRAVVAGLVVDLRTKQNKNGKRMGFAT
LDDRSGRLEVAVFSDVYEQNRDLLLKDTLLVVEGGLGVDDFSGQMRLTAERLCSIEQARG
QYARALSLKLNAAESEPLDYADVLMTILKPYAGGPCPVSILYRGISAETELLLGDTWRVT
PGDELLRRLRARLGVECVSMQYS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataagttcatccacctccgtctccacaccgaatactctctggtagacggcatc
gtccgcatcaagcctctgataaaacaggtggccgcgttaggcatgcccgcagtggcggtg
acagaccagtccaatatgttctcgctggtcaaattttataaagcagcgatgggcgcgggc
atcaaaccgatagcaggctccgatgtctggttcttcaacccgcaggaaccggcgcgcccg
catcggctgacgctgctggtgcaaaacgaacagggatatcgcaatctcaccgcgctggtg
tcgcgcagttatcaggaaaatcagcatcagggcgttccgatgctgatgaccgagtggctg
aacgactgcaatcagggcttgatcgcgctttccggcgcgcgcgaggggcgtatcggccag
gccttgctcgcggataacgccgatgaagcgcgccgcgaactcgaacactggctgccgctg
ttcgaaaaccgcttttacctggaattgcagcgcaccgggcgtcccggcgaagaaatctac
ctggatgccgcgctcgatctggccgtcgagttcgatgtgccgccggttgcgaccaacgac
gtgcgcttcctgaaagccgaagaattcgacgcccatgaagcgcgcgtctgcattcatcag
ggccgggtgctggacgacgcgcggcgtccgcgcgattacagcgagcagcaatatctgcgc
agcgccgacgaaatgtgcgagctgtttgccgatattccggaagccttgcagaacaccgtc
gaaatcgccaagcgctgtaatctgagcctgacgctgggcaaaagctatctgcccgatttc
ccggttccacccgaaatgacgctggaggatttcttcagtgatgagtcgcgcaagggtctg
gagcagcgcatgcgcatcctgtttccggacagcgccgcccacccggaaaaatatcagcgc
tattacgaccggctggaaatcgagctgggcgttatcaagcagatgggctttcccggctat
tttctgatcgtggccgactttatccagtgggcgaaaaacaacggcatcccggtcggaccg
ggacgtggttcgggggccgggtcgctggtggcctacgcgctgaaaatcaccgatctcgat
ccgctcgaattcgatctgctgttcgaacgctttttgaaccccgaacgcgtttccatgccc
gacttcgatatcgacttctgcatggagcgccgcgacgaagtgatcgattacgtctcgcgc
cattacggacgcgatcgcgtttcgcagatcatcacctacggcagcatggccgccaaggcg
gtggtgcgcgacgtcgggcgcgtgctcggacacccttacggttttgtcgaccgcatcgcc
aagctgatcccgttcgaactgaacatgacgctggacaaggcactgaacgacagcgaagac
ctggccagggtctatgagcaggatgatgaagttcgcgcattgatcgatctggcgaaaagc
ctggaaggcatcacccgtaatgccggcaagcacgcgggcggcgtggtgattgcgccgtcg
cagctgatcgacttttcgccgctgtattgcgaacagggcggcgacaatctggttacgcag
ttcgacaaggacgatgtcgaagcggtggggctggtcaagttcgacttcctcggcttgcgc
acgctgaccatcatcgactgggcggtcgaagccattaaccgccgccgcgccaatgcaggt
gaaacgccggtcgatatcaacctgatcccgcgcgacgaccccgagtcctactccctgctc
aagcgttgcgccaccactgccgtattccagctcgaatcgcgcggcatgaaggacttgatc
cggcgtttgcagccggactgcttcgaagacatcatcgcgctggtggccttgttccgtccg
gggccgttgcagtcgggcatggtcgacgacttcatcaaccgtaaacaggggcgcgccaag
gtcgaatacccgcatgccagcctggaaaacatcctcaaaccgacctacggcgtgatcgtc
taccaggaacaggtgatgcagatcgcccaggaactggccggttacacgctgggcggcgcc
gatctgctgcgccgcgcgatgggcaagaaaaaggccgaggaaatggcccagcagcgcgca
attttcgtcagcggttcgatagggcgacaggtcgaggaaacgacggccagctatatcttc
gacctgatggaaaagttcgccgagtacggtttcaacaaatcgcattcggcggcctatgcg
ctggtggcctatcagaccgcctggctgaaggcgcattatccgtccgaattcatggcggcg
gtattgtccgccgatatggacaacaccgataaagtggtggtgctgattgaggaatgccgc
gagatgaagctggagatcgtgccgcccgatatcaacagctcgaactatcgttttgtcgcg
cgcgacagcaacagcatcgtctacggcctgggcgcactgaagggcgtcggcgaaaatgcc
atcgaagacatcatccgtcagcgcgacgcgcaggggccttacgccaacctgttcgatttc
tgccgccgtatcgacttgcgcaaggtcaaccggcgcgtgctggaggcgctgattcatgcc
ggagcgatggacagcttcgatggcaaccgcgcccgtcatatcgccgaattgccggatgcg
ctgaaggcggccgagcagcatggcaaaatggccgaaaccgggcagcacgatttgttcggc
ctgatgctggacgagccggaatgtccggttaacttgccgcaaatccagatcgaaccgtgg
agcgaagagcagcgtctgtccaatgaaaaggcgatactgggcctttatctgaccgggcat
ccgattacgcaatacgaggccgaactggcgcatatgaccaccgccaaactcggcaagctg
tacgtggaagaaaatcgcggttttggccgcaacagcgaaacgcgcgcggtagtcgccggt
ctggtggtcgatttgcgcaccaagcaaaacaagaacggcaaacgcatgggcttcgcgacg
ctggacgatcgcagcgggcggctggaagtggcggtgttctcggatgtttacgagcaaaat
cgcgacttgctgctcaaggatacgctgctggtagtcgagggcgggttgggcgtcgacgac
ttttccgggcaaatgcgcctgaccgccgagcgcttgtgcagcatcgagcaggcgcgtggg
cagtatgcgcgcgctttgtcgctgaaattgaatgcggcggaaagcgagccgctggactat
gccgatgtgctgatgacgatcctgaagccttatgccggcgggccgtgtccggtcagcatc
ctctatcgcgggattagcgcggaaacggaactgctgctgggcgacacctggcgggtgact
ccgggcgatgaattattgcgtcgcctgcgcgcgcgcctgggtgtcgaatgcgtcagcatg
cagtattcctga
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