Candidatus Methylospira mobilis: F6R98_16510
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Entry
F6R98_16510 CDS
T06248
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmob
Candidatus Methylospira mobilis
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmob03016
]
F6R98_16510 (truD)
Enzymes [BR:
mmob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
F6R98_16510 (truD)
Transfer RNA biogenesis [BR:
mmob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F6R98_16510 (truD)
Prokaryotic type
F6R98_16510 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QFY44034
UniProt:
A0A5Q0BPB4
LinkDB
All DBs
Position
complement(3641383..3642426)
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AA seq
347 aa
AA seq
DB search
MTGIDLPYAYGGATGSGILKQTPEDFAVEEILGFAPSGEGEHVFLDVEKTGANTDDVAVR
IAEFAGVTRMSVSYAGLKDRHARTRQWFSVHLPGKLDPDWQALNSPELRVLEACRHNRKL
KKGTLKGNRFHLRIRRLEADRALLEQRLRQIARDGAPNYFGPQRFGHGGQNIDKAKALFD
GSLATRNRHLRGIYLSAARSHIFNLILAERVRRQNWNRALEGDAFTFPDSHSFFCGALTP
EILERVAAFQIHPSGPLWGTGELPTRSEARELEAAVAEQEAELCRGLERNNVEMARRALR
INPGEFGWELGGNGEDGEQLLVSFTLPAGAYATTALREALVFDAAFD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcattgatctgccttacgcctatggcggcgctacgggcagcggcatattgaaa
caaacgccggaagactttgcggtcgaagaaatactcggctttgctccctcgggcgagggc
gagcatgttttcctggatgtggaaaaaaccggcgcaaataccgatgatgtagccgtgcgc
atcgccgaattcgcaggcgttacacggatgtcggtcagttatgcggggctcaaggaccgc
catgcgcgcacccgccaatggttcagcgtgcatctgcccggcaaactggacccggactgg
caggcactgaacagcccggagctgcgcgtgctggaagcatgccgtcataatcgcaaactg
aaaaagggaacgctcaaaggcaaccgctttcacctgcgcatccgacggctggaagctgac
cgggcgctgctggaacagcgtttgcggcagatagcgcgcgacggcgcaccgaactatttc
ggccctcagcgcttcggacacggcggacaaaacatcgacaaggcgaaagcgctgttcgac
ggcagcctggccacgcgcaaccgccatctgcgcggcatttatctctccgccgcgcgcagc
catattttcaacctgattctggccgagcgcgtgcgccggcaaaactggaaccgggcgctg
gaaggcgacgcgtttacctttcccgattcgcacagttttttttgcggcgcgctgacgccg
gaaatattggagcgcgtagccgctttccaaatccacccgagcgggccgctctggggcaca
ggcgaactgcccacccgctccgaagcgcgtgaactggaagctgcggttgcggagcaggaa
gcagaactctgtcgcggactggagcgtaacaacgtggaaatggcgcgccgcgccttgcgc
attaatccgggcgaatttggctgggagctgggtggcaacggcgaggacggcgaacagttg
ctggtcagctttacgctgccggcaggcgcttatgccacgaccgcattaagagaagcattg
gtgtttgacgcggcatttgattag
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