Candidatus Methylospira mobilis: F6R98_16675
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Entry
F6R98_16675 CDS
T06248
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mmob
Candidatus Methylospira mobilis
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmob03021
]
F6R98_16675 (rpoH)
Transcription machinery [BR:
mmob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F6R98_16675 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_25
HTH_19
Motif
Other DBs
NCBI-ProteinID:
QFY44062
UniProt:
A0A5Q0BLQ4
LinkDB
All DBs
Position
complement(3676960..3677811)
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AA seq
283 aa
AA seq
DB search
MAYALTLPGNFPVGSIDDYVTAVNKVPRLEAEEERALARRFRDENDLDAARQLVLSNLRF
VVHIARGYMGYGLPLQDLIQEGNIGLMKAVKHYDPEVGVRLVSFGVHWIRAEIHEYIIQN
WRIVKVATTKAQRKLFFNLRKFKNRLGWFTHDEASRVAEELGVDVSAVYEMEGRLSGQDT
SFDAHDDDDEHESSAPAYYLQQSNADPAEFLADDQAGEHAQARLLDAMDTLDERSRDIVA
CRWLNEKKLTLHDLADRYSVSAERIRQLENNAMKKLRLALLEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgcattaacgctgcctggtaattttcccgtcggttcgatagacgattacgtc
accgccgttaacaaggttccacgcttggaagccgaggaggagcgggcgctggcgcgccgt
tttcgcgatgaaaacgatcttgatgcggcgcgtcagctcgtcttgtccaacctgcgtttt
gtggttcatatcgcgcgcggttacatgggctacggattgccgttgcaggatctgattcag
gaaggcaacatcggcttgatgaaggccgtgaagcattacgacccggaagtgggggtgcgg
ctggtgtcgttcggcgtgcattggatcagggccgaaatacacgaatacattatccagaac
tggcgtatcgtcaaagtggcgaccaccaaggcgcaacgcaagctgttcttcaatttgcgc
aaattcaagaaccggcttggctggtttacccatgacgaagccagccgggttgcggaagag
ctgggcgtcgatgtatcggcggtatacgaaatggaaggccggttgagcggtcaggacaca
tcgttcgatgcgcacgacgatgatgacgagcacgagagcagcgcgcctgcttattatcta
cagcagagcaatgccgatccggcagaatttctggctgacgatcaggccggcgaacacgct
caggcgcgcctgctggatgcgatggatacgctggacgagcgcagccgcgacatcgtggct
tgccgctggttgaacgagaaaaagctgaccttgcacgaccttgccgatcgttacagcgtt
tcggccgagcgtatacgtcagttggaaaataatgcgatgaagaagctgcgtctggctttg
ctggaggcttaa
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