Candidatus Methylospira mobilis: F6R98_17080 Help Entry F6R98_17080       CDS       T06248                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism mmob  Candidatus Methylospira mobilis Brite KEGG Orthology (KO) [BR:mmob00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mmob03400]     F6R98_17080 Enzymes [BR:mmob01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      F6R98_17080     5.6.2.6  RNA 3'-5' helicase      F6R98_17080 DNA repair and recombination proteins [BR:mmob03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     F6R98_17080 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII PhoH TrmB WHD_2nd_Lhr Motif Other DBs NCBI-ProteinID:  QFY45167 UniProt:  A0A5Q0BSX2 LinkDB All DBs Position complement(3766308..3770771) Genome browser AA seq 1487 aa AA seqDB search MKLDYRGVDKRIRHAGSLLLPQQPQAVNNCLVLSSHLNLMPLTSFHPAVSAWFNASFPAP TACQAEAWTAIKQGRHTLIAAPTGSGKTLAAFLAAIDELVRRGFEQRLEDNTQILYISPL KALSNDVQKNLEAPLAGIQQQLQEISGIELNLRAMVRSGDTPVAVRTAMLKHPPHILVTT PESVYILLTSEGGRRMLKSVRTVIVDEIHAIIGSKRGAHLALSLERLQRLTGAPLARIGL SATQSPIETVADFLVGATQKNILWERSSDRDFRGQKPASTKPERQNSEQVRCKIIDSGHL RQLDLALELPDTPLEAVLSNDAAKSIHERMAELIGAHHTTLVFVNTRRMAERLTRALSER LGEDRVTSHHGSLACEQRLSAECRLKNGELKALVATASLELGIDVGDVDLVCQLGTTGSI SVFLQRVGRSGHFAGGVPKGRLFPTTRDELVECLALLNAIRRRELDQLRIPSQPLDVLAQ QIVAMVACEDWQEDDLFDCVRIAWPYRVLERQTFDDVVNMLTDGFDTRAGLRSAHLYRDA INKRLSARRGARLTALTCGGAIPDNADYRVILEPSGDFIGSVDEDFAIESMAGDVFQLGN ASWRVLRLEAGRLRVEDAQGVPPSIPFWFGEAPGRTHELSLAVSRLRVEIAGRLQDSGQD IAAVGGWLQQQLNVSATAAGQAVAYLSAAAVTLGVMPSFETVVFERFFDESGGMQFIIHA PFGSRVNRAWGLALRKRFCRGFNFELQAAATENAVILSLSTSHSFPLDEVARYLNSKTVR DLLIQALLAAPMFTIRWRWNAVCALALRRFQGGKKTPPHLLRMQAEDLVASVFPDQLACL ENIVGDRQIPDHPLVFQTIEDCLTEAMDIERLLDIISGIEQSRIQVVSRDLVEPSPLAAE IVNARVYSFLDGAPLEERRTRAVASRRWLDPSAADDLGKLDADAIERVRRESWPEAASRD EFHDALNTTGFIKHPEESNRHWAKYFEQLQQQNRVAAYALPAHSLWIAAERLPQFQTLYP ELMPNPSPQLPDELLQREWSREQALVEILRARLGALGPVAAQRLADDLALPLRDIDSALL ALQTEGFVLAGRYTPDAQATEWCERRLLARIHYYTLHRLRQEIEPVTSALFMRYLLRRHQ LLPDLRGEGPEALAKILNLLEGCEAAAIAWESDLLPARLQGYDPAWLDALCLSGKTVWLR ASGNGAGPVKSTPITLLPRRQAAYWHVAQREQPALGSSAQLLLTTLRAHGASFFEELAEN SGMLKTQAETALEELVGKGLVNADSFKGLRALLTTEDKKRRYRGIHPYAIEDAGRWAQLK ASPAEINENERLQHIAGCLLKRYGVLFRALLTRETLAPSWQDLLPVLRRMEARGEIRGGR FIAGQYGEQFALPETVEALRALRKQDGENEICVISASDPLNLLGILLPGPKIAALPGNRI LFRAGIPVAVLAGKETKFLAQIEPEDEWAIKNQLQRKLLPPQLKAYL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgaagttggattatcgtggggtggataagcgcattcgccacgcaggaagcttgctcttg cctcaacaaccccaagccgtgaataattgcttggttctttcctcacatttaaatctcatg cccctgacctcattccaccccgccgtcagcgcctggttcaacgccagctttcccgctccg accgcgtgtcaggctgaagcgtggacggcgatcaagcagggaaggcataccctgattgcc gcgccgaccggttcgggcaaaaccctggcggcgtttctggcggcgatagacgagttggtg aggcgtgggttcgagcagcggctggaagacaatacgcagatactttatatctcgccgctg aaagcgctcagcaacgatgttcagaagaacctggaagcgccgttggcgggcatccagcag cagttgcaggaaatcagcggcatcgaactgaatttacgggcgatggtgcgtagcggcgac acgccggttgcggtacgcaccgcgatgctgaaacatccgccgcatattctggtgacgacg ccggagtcggtttatatcctgctgaccagcgaaggcgggcggcgcatgctgaaatcggtg cgcacggtgatcgtcgatgaaattcacgccatcatcggcagcaagcgcggcgcacatctg gcgctgtcgctggagcggttgcagcgtctgaccggcgcgccgttggcgcgcatcgggctg tcggctacgcaaagtccgattgagacggtggcggattttctggtgggcgcaacgcagaaa aatatcctgtgggagcggtcttcagaccgcgattttcgcgggcagaagccagcttctacc aaaccagagcgccagaacagcgaacaagtacgctgcaaaatcatcgatagcggccatttg cgtcaactcgatctggcgctggagctgccggatacgccgctggaagcggtactgtccaac gatgccgccaaatcgatacacgagcgcatggccgaactgatcggtgcgcatcacaccacg ctggtgttcgtgaacacgcggcgcatggcggaacggctgacgcgggcgttgagcgagcgt ctgggcgaagaccgggtcacttcccatcacggcagtttggcgtgcgaacagcgtttgtcc gcagaatgccggttgaaaaacggcgaactgaaagcgctggtcgccacggcctcgctggag ctgggcattgatgtcggcgatgtcgatctggtgtgccagctcggcaccaccggctcgatt tcggtatttctgcagcgcgtcgggcgttccgggcattttgccgggggcgtaccgaaagga cgtttgtttccgaccacgcgcgacgaactggtggaatgcctggcgctgctcaatgcgata cgccgccgcgagctggatcagctgcgtatcccgagccagccgctggatgtgctggcgcag cagatcgtggcgatggtcgcctgtgaagactggcaggaagacgatctgttcgattgcgtg cgcatcgcctggccttatcgcgtgctggaacggcaaaccttcgacgacgtggtaaacatg ctgaccgacggtttcgatacccgtgccggactgcgtagcgcgcatttgtaccgcgacgcg atcaacaagcggctgtccgcacggcgcggcgcgcgcttgacggcgcttacctgcggcggc gcgataccggacaatgccgattaccgggtgatactggaaccgtccggcgatttcatcggc agcgtcgacgaggatttcgccatcgagagcatggcgggggatgtgtttcaactgggcaac gccagctggcgcgtgctgcgtctggaagcggggcgcttgcgcgtggaagacgcgcaaggc gtgccgcccagcattccgttctggttcggcgaagcgccgggacggacgcatgagctgtcg ctggcggtgtcgcggctgcgcgtggagatcgccggacgcctgcaagacagcgggcaggac atagctgcggtcggcggctggttgcaacaacaattgaatgtgtcggcaacggctgcgggg caggccgtggcctatctgtcggcggcggcggtcacgctgggggtgatgcccagcttcgaa acggtcgtattcgagcgcttcttcgacgaatccggcggcatgcagttcatcatccatgcg ccgttcggctcgcgcgtgaatcgcgcctgggggctggcgttgcgcaagcgcttttgccgc ggtttcaatttcgaactgcaggccgccgcgactgaaaacgcggtgatcctgtcgttaagc acctcgcacagttttccgctcgatgaagtcgcgcgctatctgaacagcaaaactgtgcgc gacctgctgatacaggctttgctcgccgcgccgatgttcacgatacgctggcgctggaac gcggtctgcgcgctggcgctgcgccgttttcagggcggaaagaaaacgccgccgcatcta ttacgcatgcaggcggaagatctggttgcctcggtatttcccgatcaactggcctgtctg gaaaacatcgtcggcgaccgccagattcccgatcacccgctggtgtttcaaaccatagaa gattgtctgactgaggcgatggatatcgagcgtctgctcgacattatcagcgggatagaa cagagccgtatccaggtcgtcagccgcgatctggtcgagccgtcgccattggcggcggaa atcgtcaacgcgcgcgtctacagctttctcgacggcgcgccgctggaagaacgccgcacg cgcgcggtcgccagccgccgctggctcgatccgtccgcagccgacgatctcggcaaactc gacgccgacgccattgagcgggtgcgccgcgagagctggccggaagcggccagccgcgac gagtttcacgatgcgttgaataccaccggtttcatcaagcacccggaggaaagcaaccgg cattgggccaaatacttcgagcaactgcaacagcagaaccgcgtcgcggcctatgcgctg cccgcgcatagcttgtggatcgccgccgaacgtctgccgcagtttcaaacgctgtatccc gaattaatgcccaaccccagcccgcagttgccggacgagttgctgcaacgcgaatggagc agggaacaggcgctggttgaaattctgcgcgcgcgcctcggcgcattggggccggtggca gcgcagcgtctcgccgacgacctggcgctgccgctacgcgacatcgacagcgcgctgttg gcattgcaaaccgaaggcttcgtattggcgggacgttacacgccggatgcgcaagcgacg gaatggtgcgaacgccgtctgctggctcgcattcattactacacgctgcaccggctgcgc caggaaatcgaaccggtgacatcggcgctgttcatgcgctatctgctgcgccgtcatcaa ctgctgccggacctgcgcggcgaagggccggaagcgctggcgaagatattgaacctgctg gaaggctgcgaagccgccgccatcgcctgggaaagcgacctgttgcccgcgcgcctgcaa ggctacgatccggcctggctcgacgcgctgtgtctgtccggcaaaacggtctggctgcgc gcctccggcaacggcgccgggccggtcaaatcgacgccgattacgctgttgccgcgacgg caggcggcctactggcacgtcgcccagcgggaacagcccgcgctcggttccagcgcgcag ctattgctgacgaccttgcgcgcgcacggtgcgtcgttcttcgaagagctggcggaaaat tccggaatgctgaaaacgcaggccgaaaccgcgttggaagaactggtcggcaaaggcttg gtcaatgccgacagcttcaaaggcctgcgcgccttgctgaccaccgaagacaagaagcgc cgctatcgcggcatacacccttatgctatcgaagacgccggacgctgggcgcagctgaaa gcgtcgccggcggaaatcaacgaaaacgaacggctgcagcatatcgcaggctgtctgctg aaacgctacggcgtgctgttccgcgcattgctgacgcgcgaaacgctggccccttcctgg caggatttgctgccggtgctgcgccgcatggaagcgcgcggcgaaatacgcggcggacgc tttatcgccgggcaatacggcgaacaattcgcgttgccggaaaccgtggaagcattgcgc gcgctgcgcaaacaggacggcgaaaacgaaatatgcgtaatcagcgcctccgatccgctc aacctgctcggcatcctgctgcccggccccaaaatcgccgcgctgccgggcaaccgcatc ctgttcagagccggtattcctgtcgccgtattggcaggaaaggaaaccaaattcctggcg cagatagagccggaagacgagtgggcgatcaaaaaccagttgcagcgcaaactattgccg ccgcagttgaaggcgtatttgtag

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