Candidatus Methylospira mobilis: F6R98_18300
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Entry
F6R98_18300 CDS
T06248
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmob
Candidatus Methylospira mobilis
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmob03032
]
F6R98_18300 (topA)
03400 DNA repair and recombination proteins [BR:
mmob03400
]
F6R98_18300 (topA)
Enzymes [BR:
mmob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F6R98_18300 (topA)
DNA replication proteins [BR:
mmob03032
]
Prokaryotic type
DNA Topoisomerases
F6R98_18300 (topA)
DNA repair and recombination proteins [BR:
mmob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F6R98_18300 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QFY44344
UniProt:
A0A5Q0BQ64
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All DBs
Position
4030203..4032506
Genome browser
AA seq
767 aa
AA seq
DB search
MSQNLVIVESPAKAKTIEKYLGKDFHVLASYGHIRDLVPKEGAVDPEHDFAMKYEVIEKN
QRHVQAIAAAAKKADALYLATDPDREGEAISWHLYEILKEKKLLKDKPVHRVVFHEITKR
AITEAIANPAELSIDLINAQQARRALDYLVGFKLSPLLWKKIRRGLSAGRVQSPALRMIV
EREAEIAAFQTREYWTIESVSSTDGHSFKARLTYYQDEKIEQFSIVNEEQAYGIRDRLLE
LAQGHLVVEKVEEKERKRNPAAPFTTSTLQQEAARKLGFTTRRTMSVAQQLYEGIDLGGE
SVGLISYMRTDSVNLANEAVQEIRDLIAQRFGKANVPGTPRTYKTKSKNAQEAHEAIRPT
SAMRAPEQVKPHLSPDQFKLYQLIWKRTVACQMIHATIGTTAVDLQCGERNILRATGSTV
INPGFMAVYLEGRDDAPAGDEDESFLPALKQGQRVELLDLIAGQHFTEPPPRYTEASLVK
TLEEFGIGRPSTYASIISTLQQRRYVELDNKRFVPTDVGTIVNKFLTEHFTQYVDYHFTA
NLEDELDAVSRGEKNWIPLLKDFWGPFQSLITEKDGSLKRADVTHEAIEEACPQCGGPLS
IRLGRNGRFIGCNSYPTCKYTRNLNDDSAPAEPEVVEGRTCPLCDAQLVVKTGRYGKFIG
CSGYPTCKHIEPLEKPQDTGIICPVCGKGNLTQRKSRFGKLFYSCSTYPGCTYAVWNPPL
GEPCPNCRWPILTLKTTKRRGTEKVCPQKECGYATPYEGDINSAEPA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacctggtcattgttgaatcccctgcgaaagccaaaaccatagaaaaatat
ctgggcaaggatttccatgttttggcttcctacggccatattcgcgacctggtgcccaaa
gagggtgcggtagacccggaacacgactttgcgatgaagtacgaggtcatcgaaaaaaac
cagcgccatgtccaggctattgctgcagcggcgaaaaaagccgacgcgctgtatctggcg
accgacccggaccgcgaaggcgaagccatttcatggcatttgtacgaaatactgaaggaa
aaaaaactgctcaaggacaaaccggtgcatcgcgtggtttttcacgaaataaccaaacgc
gcaatcaccgaagccattgccaatcccgcagaactttccattgacctgatcaacgcccag
caagcccggcgtgcgctggattacctggtcggattcaaactgtcgccgctgctgtggaag
aaaatacggcgaggactatccgccggacgcgtacaaagccccgcgctcagaatgatcgtg
gagcgcgaagcggagattgccgcgtttcaaacgcgcgagtactggaccatcgaatcggta
tcctctacggatgggcactcgttcaaggcgcgcctgacttattatcaggacgaaaagatc
gagcaattcagtatcgtcaatgaagaacaggcctacggcatcagagaccggctgctggag
ttggctcagggccatctcgtcgtggaaaaagtagaagaaaaggaacgcaaacgcaacccg
gcggcgcccttcaccacatccacattgcagcaggaagccgcacgcaaactcggattcacc
acgcgccggaccatgagcgtcgcgcaacagctctatgaaggtatcgatcttggcggcgag
agcgtcggcctgatcagctacatgcgcaccgactcggtcaatctggccaatgaagcggta
caggaaatacgcgatctcatcgcccagcgctttggcaaggccaacgtacccggcacgccg
cgcacttacaaaaccaaaagcaaaaacgcccaggaagcgcacgaagccatccgccccaca
tccgcaatgcgcgctccggaacaagtcaaaccgcatctgagtccggaccagttcaaactg
taccagctgatatggaaacgcacagttgcctgccagatgatacacgccactatcggcaca
acggcggtcgatctgcaatgcggagaacggaatatactacgcgccaccggttcgaccgtc
atcaacccgggcttcatggccgtctacctggaaggcagggacgacgcgcccgcaggcgat
gaagatgaaagttttttacccgccctgaagcaagggcagcgtgtggaactgctcgatctg
atcgcaggacagcattttaccgaaccaccaccccgctatacggaagccagtctggtcaaa
acgcttgaagagttcggcatcggccgtccgtcgacctacgcctccattatttcgacgctg
cagcaacggcgctacgtcgagctggacaacaaacgcttcgtaccgaccgatgtcggaacc
atcgtcaacaaatttcttaccgagcattttacccagtacgtcgattatcactttacagcc
aatctggaagacgaacttgacgcggtctctcgcggcgaaaaaaactggataccgctgctg
aaagacttctggggaccgttccagtcgctgataaccgaaaaagacggcagcctgaaacgt
gcagatgtgacgcacgaagccatcgaagaagcttgtccgcaatgcggcgggccactgtcg
atacgccttggacgcaacggacgctttatcggctgtaacagctacccgacctgcaaatac
acccgcaaccttaacgacgacagcgcccccgcggaaccggaagtggtggaaggccgcacc
tgcccgctatgcgacgcccaactggtggtcaaaaccggacgttacggcaagtttatcggc
tgcagcggctacccgacctgcaagcacatagaaccgctggaaaaaccgcaggataccggc
atcatctgtccggtatgtggaaagggcaacctgacgcaacgcaaatcgcgttttggaaaa
ctgttttattcgtgctcgacctatcccggctgcacttatgcagtgtggaacccccctctg
ggcgaaccctgccccaattgccgctggccgatactgacgctgaaaaccaccaaacgcaga
ggcactgaaaaagtctgcccgcaaaaggaatgcggctacgccaccccatacgagggagac
atcaacagcgcggaaccagcttga
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