Candidatus Methylospira mobilis: F6R98_20470
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Entry
F6R98_20470 CDS
T06248
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mmob
Candidatus Methylospira mobilis
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmob03032
]
F6R98_20470 (gyrB)
03400 DNA repair and recombination proteins [BR:
mmob03400
]
F6R98_20470 (gyrB)
Enzymes [BR:
mmob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F6R98_20470 (gyrB)
DNA replication proteins [BR:
mmob03032
]
Prokaryotic type
DNA Topoisomerases
F6R98_20470 (gyrB)
DNA repair and recombination proteins [BR:
mmob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F6R98_20470 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1_N2
TBPIP_C
Motif
Other DBs
NCBI-ProteinID:
QFY44709
UniProt:
A0A5Q0BM79
LinkDB
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Position
4496290..4498713
Genome browser
AA seq
807 aa
AA seq
DB search
MSMQQANEYDSSNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYC
KSVKVIIHPDESVSVSDDGRGIPVDIHQEEGRSAAEVIMTVLHAGGKFDDNAYKVSGGLH
GVGVSVVNALSETLELEVRKNGRLYKQSYRHGDPLAPLAEVGEAQGSGTKIRFKPSAETF
THIEYSYEILAKRLRELSFLNSGVRIELHDERTAREDVYEYEGGIQAFVQHLNKNKTPLF
DKVFYFSTEREDGIVVEAALQWNDSYQENIYCYTNNIPQRDGGTHLAGFRGALTRTLNQY
IEAQGIQKKQKIVTSGDDAREGLTAILSVKVPDPKFSSQTKDKLVSSEVRPAVESSMNEK
FDAFLLENPSIARLIAGKMIDAARAREAARKAREMTRRKTTLDIAGLPGKLADCQERDPA
LSELFIVEGDSAGGSAKQGRDRRTQAILPLKGKILNVERARFDRMLSSEEVGTLITALGC
GIGRDEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYK
VKKGKQEYYVKDDGELDNYLLQMALEKTRLYIGEGAPPIQGAGLEQLAKEYLTVRSIIAR
HSHRFDEAFLEVLQELPQMRADTMKDGPRCQEWFTALQRQLDKTVKTAVYSIEFNFDPYA
EEFAVKVMKRQHGVTNYFEITPTFFASNDYARIMALGAKMEGLFGDQTSVGSEDKKVPVK
NFKQAFEWMMADVRKGQHIQRYKGLGEMNPEQLWETTLDSNTRRLLQVKVDDAITADEVF
TTLMGDEVEPRRAFIEHNALEVSNLDI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcaacaagccaacgaatacgatagtagcaatatcaaggtactgaaagggctg
gatgcggtaagaaaacgcccgggtatgtatatcggtgataccgatgacggcaccggcctg
catcatatggttttcgaggttgtagataactcaatcgacgaagcgcttgccgggtattgc
aaaagcgtaaaagtgattatccatcctgacgaatccgtgagcgtgagcgatgatgggcgc
ggcataccggtagacatccatcaggaggaagggcgttcggcggcggaagtgattatgacg
gtgctgcatgccggtggaaagtttgacgataatgcctacaaggtatcgggtgggttgcac
ggcgtgggcgtgtcggtggtcaatgcgctttcggaaacattggagctggaggtgcgaaaa
aacggacgtttatacaagcaaagctatcgtcatggcgacccgcttgcaccgctcgctgaa
gtaggagaagcgcaagggagcggcacgaagatacgttttaaacccagcgccgaaacattt
acgcacatagaatatagttacgaaatactggccaagcgcttgcgagagctttcgttcctg
aattccggtgtgcgcatcgagctgcatgacgaacgcactgcgcgtgaggatgtatacgaa
tacgaaggcgggatacaggcttttgttcaacatctgaacaaaaacaagacgccgttgttc
gataaagtattttatttcagtacagagcgtgaagacggcatagttgtcgaggctgcgtta
cagtggaacgactcctaccaggaaaatatctattgttataccaacaatatcccacagcgc
gacggcggaacccatctggccggttttcgcggcgcgctgacgcgcacgctgaatcaatat
atcgaagctcagggtatacaaaagaaacaaaaaattgttacctcgggcgacgatgcacga
gagggtttgaccgccatactttcggtgaaggtgccggaccccaaattctcatcgcagacc
aaggacaagctggtttcatcggaagttcgtccggcggtggagtcgtcgatgaatgaaaaa
tttgacgcattcctgctggaaaacccgtcgatagcgcgtttaattgcgggcaagatgatc
gatgccgccagagcgcgcgaagcggcgcgtaaggcgcgagaaatgacgcgtagaaaaacg
acgctggatatcgccggattaccaggtaagctggcggattgccaggaacgtgatccggct
ttgtccgaactgtttattgtcgaaggcgactcggccggcggatcggcaaaacagggacga
gaccggcggacccaggcgattttgccgctgaaaggaaaaatcctgaacgtggagcgagcc
cgattcgaccgcatgttgtcgtctgaagaagtcggaacgttgataacggcgctgggctgc
ggcataggccgtgatgaatataatccggacaagctgcgataccacagaattattatcatg
accgatgccgatgtcgacggctcacatatccgtaccctgctgttgacatttttttaccgc
caaatgccggaactgatagagcgcggatacatttacatcgcgcagccgcccctgtacaaa
gtgaaaaaaggtaaacaggaatactacgtcaaggatgacggagagctggataattacctg
ttgcaaatggcgctggaaaaaacccggctgtatatcggtgaaggcgcaccgcctatacag
ggcgccgggcttgaacagcttgcaaaagaatatctgaccgtgcgcagcattattgcgcgg
cacagccatcgttttgatgaggctttcctggaggtattgcaggagttgccgcagatgcgc
gcggataccatgaaagacggtccgcgctgccaggaatggttcacggcattgcagcggcaa
ctcgataaaacggtaaaaacagccgtatacagcatagaattcaactttgacccatatgcg
gaagagtttgcggtcaaggtcatgaagcgccagcatggcgtgaccaattattttgaaata
acgccgacattttttgcatcaaacgattacgcacgtatcatggcgctgggagcaaaaatg
gaaggactgtttggcgaccaaaccagcgttggctcagaagacaaaaaggtgccggtaaaa
aacttcaaacaggcattcgaatggatgatggccgacgtcaggaaaggccagcatatacag
cgctataaagggctgggtgaaatgaatcccgagcagctatgggaaaccacgctggatagc
aacacacgccgtctgctacaggtgaaggttgatgacgcgatcaccgccgacgaagtattt
acaaccttgatgggggatgaggtggagcctcgcagggcgtttatcgagcacaatgctttg
gaagtatccaatctggatatctga
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