Mycolicibacterium monacense: EWR22_19940
Help
Entry
EWR22_19940 CDS
T08739
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mmon
Mycolicibacterium monacense
Pathway
mmon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EWR22_19940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmon03021
]
EWR22_19940
03019 Messenger RNA biogenesis [BR:
mmon03019
]
EWR22_19940
Transcription machinery [BR:
mmon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EWR22_19940
Messenger RNA biogenesis [BR:
mmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EWR22_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
Fungal_virus_P2_C
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QHP87445
LinkDB
All DBs
Position
complement(4190033..4192018)
Genome browser
AA seq
661 aa
AA seq
DB search
MTDTDLFTADSAERTELPNVVNTETSTASEGPAVTTTTAESAPTADVASGDRAASLTSMV
LPELRALARQIGVEGASGMRKSELIAAIRERRGDGGAANAESAAAPQTPPRRERRSASRQ
AGAAEAKAPEAPEAKAPEVKAPEVKADAPAEEAAAEPKTERPRNDRTKAEKPAAQQPDGE
QPKGDQPKGEQSRGDQRRSDRPRGDQSDTRSDDRSDSDQQQGQGNRNNSNNSNNSADGDD
DGDGRGGRRGRRFRDRRRRGERGGEGGGGGDTEIREDDVVQPVAGILDVLDNYAFVRTSG
YLPGPNDVYVSMNMVRKNGLRRGDAVTGAVKVPKEGEGGGQNQRQKFNPLVRLDSVNGGP
VEDARKRPEFGKLTPLYPNQRLRLETSPDKLTTRVIDLIMPIGKGQRALIVSPPKAGKTT
IMQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTTVAELA
IERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARN
IEEGGSLTIVATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTR
KDELLLGPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKTNYEFLVQVSKNTPGSVDN
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcttcacggccgacagcgctgagcgaacagagttgccgaacgtc
gtgaacaccgaaacttccacggcgtcggagggcccggccgtcaccacgacgaccgcggag
tccgccccgaccgccgatgtggcgtcgggtgaccgtgccgcctcgctgacctcgatggtc
ctgccggaactgcgcgccctggcgcgccagatcggcgtcgaaggcgcctccggcatgcgc
aagagcgaactgatcgccgcgatccgcgaacgccgcggcgacggcggtgccgccaatgcg
gagagcgccgccgcaccgcagacgcccccgcgccgtgagcgtcgcagcgcatcccgtcag
gccggcgccgccgaggccaaggctccagaggcccccgaggccaaggcccccgaggtgaag
gcccccgaggtgaaggctgatgcaccggccgaagaggccgctgcggagcccaagaccgag
cggcccaggaacgaccgcaccaaggccgagaagcccgcggcgcagcagcccgacggcgag
cagcccaagggagaccagccgaagggcgagcagtccaggggcgatcagcgccggtccgat
cgtccgcggggcgatcagtccgacaccaggtccgacgaccggtccgacagtgaccagcag
cagggccagggcaaccgaaacaacagcaacaacagcaacaacagcgccgatggcgacgac
gacggcgacggccggggtggccgccgcggccgccggttccgcgaccgccggcgccgtggt
gagcgcggtggcgagggcggcggcggtggcgacaccgagatccgcgaggacgacgtcgtc
cagcccgtcgccggcatcctcgacgtcctcgacaactacgcgttcgtccgcacctcgggc
tacctgcccggtccgaacgacgtctacgtgtcgatgaacatggtgcgcaagaacgggctg
cgccgcggcgacgccgtcaccggtgcggtcaaggtgcccaaggagggcgaaggcggcggt
cagaaccagcgccagaagttcaatccgctggtgcgtctcgacagcgtcaacggcgggccg
gtcgaggatgcgaggaagcgtcccgaattcggcaagctgaccccgctgtaccccaatcag
cggctgcgtctggagacctctccggacaagctgaccacccgcgtcatcgacctgatcatg
ccgatcggcaaggggcagcgcgcgctgatcgtgtcgccgccgaaggccggtaagaccacg
atcatgcaggacatcgccaacgcgatcacccgcaacaacccggaatgccacctgatggtg
gtgctcgtcgacgagcgtccggaagaggtcaccgacatgcagcgctcggtcaagggtgag
gtcatcgcctcgaccttcgaccggccgccgtccgaccacaccacggtcgccgaactggcc
atcgagcgcgccaagcgcctggtggagcagggcaaggacgtcgtggtgctcctcgactcg
atcacccgcctaggccgggcctacaacaacgcctcgccggcctcgggccgcatcctgtcc
ggtggtgtggactcgaccgcgttgtacccgccgaagcgcttcctgggtgccgcacgcaac
atcgaagagggcggctcactgaccatcgtcgcgaccgcgatggtggagaccggttcgacc
ggtgacacggtcatcttcgaggagttcaagggcaccggtaacgccgagctcaagctcgat
cgcaagatcgccgaacgccgggtgttccccgcggtcgacgtgaacccgtcgggcacccgt
aaggacgagctgctgctcggccccgacgagttcgcgatcgtgcacaagctgcgccgggtg
ctgtcgggtctcgacagccatcaggccatcgacctgctgatgagtcagctgcgcaagacc
aagacgaactacgagttcctggtgcaggtctcgaagaacacaccggggtcggtggacaac
gactga
DBGET
integrated database retrieval system
