Mycolicibacterium monacense: EWR22_20455
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Entry
EWR22_20455 CDS
T08739
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmon
Mycolicibacterium monacense
Pathway
mmon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EWR22_20455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmon03019
]
EWR22_20455
03009 Ribosome biogenesis [BR:
mmon03009
]
EWR22_20455
Enzymes [BR:
mmon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EWR22_20455
Messenger RNA biogenesis [BR:
mmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EWR22_20455
Ribosome biogenesis [BR:
mmon03009
]
Prokaryotic type
rRNA helicases
EWR22_20455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QHP87537
LinkDB
All DBs
Position
complement(4292247..4293920)
Genome browser
AA seq
557 aa
AA seq
DB search
MTSPEPDAPGTETTFADLQIHPEVLRAVTDVGYETPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDPNSRATQALVLAPTRELALQVAEAFGRYGAHLPVNVLPVYGGSS
YGPQMAGLKRGAQVVVGTPGRVIDHLEKGSLDLSHLDYMVLDEADEMLQMGFAEDVERIL
SDTPEYKQVALFSATMPPGIKKITKKYLHDPVEVTVKSKTQTAENITQRYIQVSYPRKMD
ALTRLLETEQGDGMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQLKDG
SIDILVATDVAARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRER
HLLNSIERVTRQKLVEIQLPSVEDVNAQRVEKFRDSIGEALNAPGIDLFRRLIEDYERDN
NVPLADIAAALAVQSRNGEEFLMTEPPPEKRRERPVRDESGPRKARDRTRSDLATYRIAV
GKRHKVMPGAIVGAIANEGGLNRSDFGHIAIKPEYSLVELPADLPKDTLKKLERTRIQGV
LINLEPDRGPKARYKGK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcctgagccggacgcccccggtaccgaaaccaccttcgctgatctgcagatt
cacccggaggtgttgcgggccgtcaccgacgtcggctatgagacgccgtcggcgatccag
gccgcgaccatcccggcgatgctcgccggctccgacgtcgtcgggctcgcccagaccggc
accggcaagaccgcggccttcgccatcccgatcctgtcgaagatcgaccccaacagccgc
gccacccaggccctggtcctcgcgccgacacgtgagctcgcgctgcaggtcgccgaggcg
ttcggccgctacggcgcgcatctgccggtcaacgtgctgccggtgtacggcggctcgtcc
tacggaccgcagatggccgggctgaaacggggcgcgcaggtcgtcgtcgggaccccgggc
cgggtgatcgaccacttggagaagggcagcctcgacctgtcgcacctggactacatggtg
ctcgacgaggccgacgaaatgctgcagatgggtttcgccgaggacgtcgaacggattctg
tccgacacccccgagtacaagcaggtggcgctgttctccgcgaccatgccgccgggaatc
aagaagatcaccaagaagtacctgcacgatccggtcgaggtcacggtcaagtccaagacg
cagaccgccgagaacatcacgcagcgctacatccaggtgtcgtacccgcgcaagatggac
gcgctgacccggctgctggagacggagcagggcgacgggatgatcgtgttcgtccgcacc
aaacaggccaccgaggaggtggccgagaagctgcgggcgcgcgggttcgcggcggcggcc
atcaacggcgacatcccgcaggcggtgcgtgaacgcaccatctcgcaactcaaggacggt
tcgatcgacatcctggtcgcgaccgacgtcgccgcccgtggtctggacgtcgagcggatc
tcgcacgtggtgaacttcgacatcccgcacgacccggagtcctacgtgcaccgcatcggg
cgcaccgggcgcgcaggccgctcgggcaccgcgctgctgttcgtcaccccgcgcgaacgg
cacctgctgaactcgatcgagcgggtcacccggcagaagctcgtcgagatccagttgccg
tcggtcgaggacgtcaacgcccagcgggtcgagaagttccgcgactcgatcggtgaggcc
ctcaacgctccgggcatcgacctgttccgccgcctcatcgaggactacgaacgcgacaac
aacgtgccgctggccgacatcgccgcggcgctggccgtgcagtcccgcaacggcgaggag
ttcctgatgaccgaaccgccgccggagaagcggcgggagcggcccgtccgggatgagagc
ggcccacgcaaggcgcgcgaccgcacgcggtcggacctcgcgacctaccgcatcgcggtg
ggcaagcggcacaaggtgatgcccggtgcgatcgtcggcgcgatcgccaacgagggcggc
ctgaaccgcagcgacttcggtcatatcgcgatcaagccggagtactcgctggtggagctg
cctgccgacctgccgaaggacaccctcaagaagctcgagcgcacacgcatccagggtgtg
ctgatcaatctcgagcccgatcgcgggccgaaggcgcgctacaagggcaagtga
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