Mycolicibacterium monacense: EWR22_27980
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Entry
EWR22_27980 CDS
T08739
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mmon
Mycolicibacterium monacense
Brite
KEGG Orthology (KO) [BR:
mmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmon03019
]
EWR22_27980 (hrpA)
Enzymes [BR:
mmon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EWR22_27980 (hrpA)
Messenger RNA biogenesis [BR:
mmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EWR22_27980 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
HA2_C
Helicase_C
OB_NTP_bind
HA2_N
DEAD
AAA_22
AAA_19
NACHT
T2SSE
nSTAND3
AAA_16
SLFN-g3_helicase
ABC_tran
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QHP88884
LinkDB
All DBs
Position
complement(5795101..5799039)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSEPSVRDLRKRLDGLTYRDAARLGRRLRNATPDKLAQLAEQISAAEELIATRLAAVPTI
SYPDLPVSDRRDEIARAIAGNQVVVVAGETGSGKTTQLPKICLELGRGIRGTIGHTQPRR
LAARTVAQRIADELDTPLGDAVGYTVRFTDQASDRTLVKLMTDGILLAEIQRDRKLLRYD
TLILDEAHERSLNIDFLLGYLRELLPRRPDLKVIVTSATIEPERFAEHFGHAPIVEVSGR
TYPVEIRYRPLEVPVVDADGDDPDDPDHEVVRTPDAGLRASGSSEMRDPTDAIVDAVREL
EAEPPGDVLVFLSGEREIRDTAEVLRGELRNTEVLPLYARLPTAEQQKVFAPHTGRRVVL
STNVAETSLTVPGIRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTAPG
ICIRLYSEEDFESRPRYTDPEILRTNLAAVILQMAALGLGDVEEFSFLDPPEKRSIRDGV
TLLQELGAFDREGELTDIGRRLARLPLDPRIGRMILQSDTEGCVREVLVLAAALSIPDPR
ERPADREDAARQKHSRFADEHSDFITYLNLWRYLGEQRKERSGSSFRRMCREEFLHYLRI
REWQDLTGQLRSIARDLGIRESDEPASPASVHAALLSGLLSHVGLREGDGQARTRGANPA
QYQGARNSRFVLAPGSVLTKRPPRWIVVADLVETSRLFGRVGASIDPDTVERIAGDLVQR
THSEPHWEADRGAVMGFERVTLYGLPLVARRRVNYSQIDPELARELFIRHALVEGDWRTK
HHFFRDNARLREELEEVEERARRRDLLVGDEEVFAFYNARIPETVVSARHFDAWWRKQRH
RTPDLLTMTRDDLLRQDGVDELPDEWRAGDLTLPLSYRFEPGAADDGITVHVPVEVLARL
GGDEFAWHVPALREELVTALIRSLPKDLRRNFVPAPDTARSVLETMKPGEEPLLESLQRE
LRRRSGVLVPIEAFDLEKIPAHLRVTFAVEKDGAEVARGKDLDTLQEQLAAPVRDAVARA
VADGLERSGLRSWPEDLDELPRTVENTSGGHRVRGYPAFVDAGSAVDVRVFATPAEQRAA
MGPGIRRLLRLSAPSPVKNVERALDMRQRLVLGANPDGSLAALIEDCADAAVDALVREPV
WTRGDFDVLRQRVAAALVPTTLDIVGRVEKVLTAAQQAQVALPANPPATQAEAIADIRGQ
LAALLPKGFVCATGAAHLANLTRYLTAIGRRLERLPHAVGADGERMERVRAVQEAYDELR
QALSPSRAAAEDVRDIGRMIEELRVSLWAQQLGTPRPVSEQRIYRAIDAITA
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaccgtccgtgcgtgatctgcgcaagcgtctggacggcctgacctaccgcgac
gccgcccgcctcggaaggcggctgcgcaacgccacacccgacaagctcgcgcagctcgcc
gagcagatctccgccgccgaagagctcatcgccacccggttggcggcggtgccgacgatc
agctatcccgatctcccggtcagcgaccggcgtgacgagatcgccagggccatcgccggg
aaccaggtggtcgtcgtcgcgggcgagaccggttccggcaagaccacgcagctgccgaag
atctgcctcgaactcggccggggtatccgcggcaccatcggccacacccagccgcggcgc
ctcgccgcgcgcaccgtcgcccagcgcatcgccgacgaactcgacaccccgctcggcgac
gctgtcggctacaccgtccgcttcaccgaccaggcctccgaccgcacgctggtcaagctg
atgaccgacggcatcctgctcgccgagatccagcgcgaccgcaagctgctgcgctacgac
accctcatcctcgacgaggcccacgagcgcagcctcaacatcgacttcctgctcggctac
ctgcgcgaactgctgccgcgccgacccgacctgaaggtgatcgtcacgtcggcgaccatc
gagcccgagcggttcgctgagcatttcggccacgcgccgatcgtcgaggtgtcgggccgc
acgtatccggtggagatccggtaccgcccgctggaggtgcccgtcgtcgacgccgatggc
gacgaccccgacgatccggaccacgaggtggtccggaccccggatgctggtcttcgcgca
agcggctcatccgagatgcgcgacccgaccgacgcgatcgtcgacgccgtgcgcgaactc
gaggccgaaccgcccggcgacgtgctggtgttcctgtccggtgagcgcgagatccgtgac
accgccgaggtgcttcgcggtgaactccgcaacaccgaggtgctgccgctgtacgcgcgc
ctgcccaccgccgaacagcagaaggtcttcgcaccgcacaccgggcggcgggtcgtgttg
tcgaccaacgtcgccgagacgtcgttgaccgtgccgggcatccgctatgtcgtcgacccc
ggcaccgcgcgcatctcccgctacagccggcggacgaaggtgcagcggctgccgatcgag
ccgatctcgcaggcgtcggccgcccagcgggccggccggtccggtcgcaccgcacccggt
atctgcatccggttgtactccgaagaggacttcgagagccggccgcgatacaccgatccg
gagatcctgcggaccaacctcgccgcggtgatcctgcagatggccgcgctcggcctcggg
gacgtcgaggagttctccttcctggatccgccggagaaacgcagcatccgcgacggggtg
accctgctgcaggaactcggggcgttcgatcgcgagggggagctcaccgacatcgggcgg
cgactcgcgcgtcttccgctcgacccgcggatcgggcggatgatcctgcagtccgacacc
gagggctgcgtccgcgaagtgttggtgctggccgcggcgttgtcgatcccggatccgcgc
gaacggcccgccgaccgcgaggacgcggcccgccagaaacactcccgcttcgccgacgag
cactccgacttcatcacgtatctcaacctctggcgctatctgggcgaacagcgcaaagaa
cgctcgggcagttcgttccgccggatgtgccgcgaggagttcctgcattacctccgcatc
cgcgagtggcaggacctgaccggccagttgcgcagcatcgcccgcgacctcggcatccgg
gagtccgacgaacccgcctcgccggccagtgtgcacgccgcgttgctgtccgggttgctg
tcgcacgtcgggttgcgggagggggacggccaggcgcgcacgcgaggagcgaatccagcg
cagtaccagggcgcccgcaactcccgcttcgtgctggcgcccgggtcggtgctgaccaaa
cgcccgccgcggtggatcgtcgtcgccgacctggtggagaccagccggttgttcggccgg
gtcggcgccagcatcgaccccgacaccgtagagcgcatcgccggtgatctggtgcagcgc
acccacagtgagccgcactgggaggccgaccgcggtgcggtgatggggttcgaacgtgtc
accctctacggcctgccgctggtggcgcgccgtcgcgtgaactactcccagatcgacccc
gaactggcgcgcgaactgttcatccgccacgcgctggtcgagggcgactggcgaaccaaa
caccacttcttccgcgacaacgcccggctgcgtgaggaactcgaagaggtcgaggagcgg
gcccgtcggcgtgacctcctggtcggcgacgaagaggtgttcgcgttctacaacgcccgc
attcccgaaaccgtggtatcagcacggcatttcgacgcgtggtggcgcaaacagcggcac
cggacccccgatctgttgacgatgacgcgcgacgatctgctgcggcaggacggcgtcgac
gaactgcccgacgaatggcgcgccggtgacctgaccctgccactgagctaccgcttcgaa
ccgggtgcagccgatgacggcatcaccgtgcacgtgccggtggaggtgctggcccgcctc
ggcggggacgaattcgcctggcacgtcccggctctgcgtgaggaactggtcaccgccctg
atccgctcgctgccgaaggacctgcggcgcaacttcgtccccgcacccgacaccgcgcgg
tcggtgctcgagacgatgaagcccggcgaggaaccgctgctcgaatcgctgcaacgcgag
ttgcggcggcgcagcggggtgctggtgccgatcgaggcgttcgacctcgagaagatcccg
gctcatctgcgggtgacgttcgccgtggagaaggacggcgccgaggtggcgcgcggaaag
gatctcgacaccctgcaggagcagttggccgcaccggtgcgcgacgcggtcgcccgtgcg
gtcgccgacgggctggaacgaagcgggttgcgttcgtggccagaggatctcgacgaactg
ccacgcaccgtcgagaacaccagtggcggccaccgggtccgcgggtatccggcgttcgtc
gacgcgggttctgcggtggacgtgcgggtgttcgcgacgccggccgagcagcgtgcggcg
atgggtccggggatccggcggctgctgcggttgtcggcgccgtcgccggtcaagaacgtg
gaacgggcgctggacatgcggcagcgcctggtgctcggcgccaatcccgacgggtcactg
gccgcgctgatcgaggactgcgcggacgcggcggtggatgcactggtccgtgaacccgtc
tggacgcgtggggatttcgatgtgctgcggcagcgggtggcggccgcgctggtgccgacg
acgctggacatcgtgggccgggtggagaaggtgctgaccgccgcgcagcaggcgcaggtg
gcgctcccggcgaacccgccggcgacgcaggccgaggcgatcgccgacattcgcggtcag
ctggccgccctgctgccgaagggtttcgtctgtgctacgggtgcggcgcacctggccaac
ctgacccgctacctcaccgcgatcggccgccggctggaacggttaccgcacgcagtcggg
gccgacggcgagcgcatggagcgggtgcgcgccgtgcaggaggcgtacgacgaactgcgg
caggcactttcgccgagccgggccgccgccgaggacgtccgcgacatcggccggatgatc
gaagagctgcgggtcagcctgtgggcccagcagctcggcacgccgcggccggtcagcgag
cagcggatctaccgggcgatcgacgcgatcacggcatag
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