Mycolicibacterium moriokaense: MMOR_03710
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Entry
MMOR_03710 CDS
T06887
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mmor
Mycolicibacterium moriokaense
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmor03019
]
MMOR_03710 (hrpA)
Enzymes [BR:
mmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MMOR_03710 (hrpA)
Messenger RNA biogenesis [BR:
mmor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MMOR_03710 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
T2SSE
nSTAND3
NACHT
AAA_30
ABC_tran
PhoH
TsaE
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BBW99434
UniProt:
A0AAD1H745
LinkDB
All DBs
Position
complement(374482..378405)
Genome browser
AA seq
1307 aa
AA seq
DB search
MSEPSVAELRKRLDGLTIRDASRLGRRLKNLRGASPDKVRKVAEQIAAAEGLVATRLAAV
PTITYPDLPVSERRDELARAITENQVVIVAGETGSGKTTQLPKICLELGRGIRGTIGHTQ
PRRLAARTVAQRIADELGTPLGEAVGYTVRFTDQASDRTLVKLMTDGILLAEIQRDRRLL
RYDTLILDEAHERSLNIDFLLGYLRELLPRRPDLKVIVTSATIEPERFAAHFNGAPIVEV
SGRTYPVEIRYRPLEVPVVADDSDDPEDPDHEIVRTEMRDQTEAIVDAVNELTAEPPGDV
LVFLSGEREIRDTAEALRHLKNTEILPLYARLPTAEQQRVFQPSKGVRRIVLATNVAETS
LTVPGIRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTAPGVCIRLYSE
DDFESRPRYTDPEILRTNLASVILQMAALGLGDIETFPFLDPPERRSIRDGILLLQELGA
FDNAAGGGKSTGAGAITDIGRRLAQLPVDPRLGRMILQADEEGCVREILVLAAALSIPDP
RERPTDREEAARQQHARFADEHSDFISYLNLWRYLGEQRKELSGNAFRRMCREEFLHYLR
IREWQDLTGQLRSIARDLGIRESDDREPADPARVHAALLAGLLSHIGLREGESRDFQGAR
NVKFVLAPGSVLTKRPPRWIVVADLVETSRLYGRIAARIQPDTVERIAGDLVARTYSEPH
WDAQRGAVMAYERVTLFGLPLVPRRRVGYSNIEPAVARELFIRHALVEGDWQTRHHFFRD
NAALRAQLTELEEKARRRDLLVGDDEIYAFYDARVPAEAVSARHFDAWWKKQRHKTPDLL
TMTRDDLLRKDDPAADQPDTWHTDELSLPLSYRFEPGAEDDGVTVHVPVEVLARLGGDEF
SWQVPALREELVTALIKSLPKDLRRNFVPAPDTARAVLASIQPDGEPILQAMQRELHRLT
RVLVPIDAFDLDKLPPHLRVTFAVESDGKEVARGKDLEALQAQLAVPIRQAVAEAVAGEL
ERTGLRAWPEDLDELPRTVEQTSGGHTVRGYPALVDAGGAVDVRVFPTAAEQVVAMGPGT
RRLLRLSVPSPAKTLERALDPRARLTLGANPDGSLAALLDDCADAATDRLAPEPAWTRAD
FTALRERVAAQLVPTTQAILGQVEKVLAVAHEVELALPADPVPAQADAIADIREQLGRLL
PKGFVTITGAGRLTDLTRYLTAIARRLDRLPHSVGADRERMARVHAVQDAFDDLVGALSP
ARAASDDVRDIERQIEELRVSLWAQQLGTPRPVSEQRIYRAIDGIAP
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgtccgtcgccgagctccgcaagcgcctcgacggcctgacgatccgcgac
gcgtcgcgccttggccgtcgtctcaagaacctgcgcggcgcctcgcccgacaaagttcga
aaggtcgccgagcagatcgccgcggcggaaggcctcgtcgccacccgcctggccgccgtg
ccgaccatcacctatcccgatctgccggtcagcgagcggcgcgacgagctcgccagggcg
atcaccgagaatcaggtcgtcatcgtcgcgggggagacgggctcgggaaagacgacccag
ctgccgaagatctgcctcgaactcggtcggggtatccgcggcacgatcgggcacacccag
ccgcggcggctcgccgcgcgcaccgtggcgcagcgcatcgccgacgagttgggcaccccg
ctgggggaggccgtcggatacaccgtgcggttcaccgatcaggcgagcgaccgcaccctg
gtgaagctgatgaccgacggcatcctgctcgccgagatccagcgcgaccgtcggctgctg
cgctacgacaccctgatcctcgacgaggcgcacgagcgcagcctcaacatcgactttttg
ctcggctatctgcgcgagctgctgccgcgacggcccgacctcaaagtgatcgtcacgtcg
gcgacgatcgagccggagcggttcgcggcgcacttcaatggggcgcccatcgtggaggtg
tcggggcggacatatccggtcgagatccggtaccggcccctcgaggttcccgtcgtggcc
gacgactccgacgaccccgaggatcccgaccacgagatcgtccgcaccgagatgcgggac
cagaccgaagccatcgtcgacgcagtgaacgaactgacggccgaaccacccggcgacgtc
ctggtgttcctgtcgggcgagcgcgagatccgtgacaccgcggaagctcttcggcatctg
aagaacaccgagatattgccgctctacgcgcggctgccgacggccgaacagcagcgggtg
ttccagcccagcaagggtgtgcgacgaatcgtgttggccaccaacgtcgccgagacgtcg
ttgacggtgccgggcatccgctacgtcgtcgaccccggtaccgcgcggatctcgcggtac
agccgtcggaccaaggtgcaacggttgccgatcgaaccgatctcacaggcgtcggcggcg
cagcgagccggccgatcgggccgtaccgcgccgggtgtgtgcatccggctgtactccgag
gacgacttcgaatcgcggccccggtacaccgatccggagatcctgcggacgaacctcgca
tcggtcatcctgcagatggcggctttagggttaggcgatatcgagacgtttccgttcctc
gacccgcccgagcggcgcagcattcgcgacggcatcctgctgctgcaggagctcggcgcg
ttcgacaacgctgccggaggcggcaaatcaaccggtgccggcgcgatcaccgacatcggc
cgtcggctggcgcagctgcctgtcgatccgcgcctgggccggatgatcctgcaggccgac
gaagagggctgtgtgcgtgagattctcgtgctggccgccgcgctgtcgattcccgatccg
cgcgaacgcccgaccgaccgcgaggaggccgcgcgccagcagcacgcccggttcgccgac
gagcactcggatttcatctcctacctgaacctgtggcgatacctgggcgagcagcgaaag
gagctttcgggcaacgcgtttcgacggatgtgccgcgaggagttcctgcactacctgcgt
atccgcgaatggcaggacctcacggggcagctccgcagcatcgcccgtgatctcggcatc
agagaatccgacgaccgcgaacccgccgacccagcgcgggtgcacgccgcgctgctggcc
gggttgctatcgcacatcgggttgcgtgagggcgagtcccgcgacttccagggtgcacgc
aacgtgaagttcgtgctcgcgccgggctctgtgctgaccaaacgcccgccgcgctggatc
gtcgtcgccgacctggtcgaaacgagcaggctgtacggccgcatcgccgcgcggattcag
ccggacaccgtcgaacgcatcgcaggagacctcgtcgcgcgaacctacagcgagccgcac
tgggacgcccagcgcggcgcggtcatggcctacgaacgcgtcacgctgttcgggctgccg
ctcgtcccgcgccgccgcgtgggctactcgaacatcgagcccgcggtcgccagggagctg
ttcatccggcacgcgctggtcgagggtgattggcagacgcgacaccacttcttccgcgac
aacgccgcgctgcgggcgcaactcaccgaactcgaggagaaggcgcgccgccgcgacctg
ctggtcggcgacgacgagatctacgcgttctacgacgcccgtgtacccgcggaagccgtg
tcggcgaggcacttcgacgcgtggtggaagaagcagcggcacaagacgcccgacctgctg
acgatgacccgcgacgatctgctgcgcaaggacgacccggccgccgatcagcccgacacc
tggcacaccgacgagctgtcgctgccgttgtcctaccgcttcgagccgggcgccgaggac
gacggggtgacggtgcacgtgcccgtcgaggtgctggctcggctcggcggtgacgaattc
agctggcaggtaccggcattgcgcgaggagctcgtcaccgcgttgatcaagtcgctgcca
aaagacctgcgccgcaacttcgttccagcaccggacaccgcgcgagccgtgctcgcgtcg
attcaaccggacggcgaacctatattgcaggcgatgcaacgcgaactgcaccggctgacc
agggtgctcgtgccaatcgacgccttcgacctcgacaagctgccgccgcacctgcgggtc
acgttcgccgtcgagtccgacggtaaggaggtcgcccgcggaaaggatctcgaggcattg
caggcacagctcgccgtgccgatccgtcaggccgtcgccgaggcggtcgccggcgaactg
gaacgaacgggcctgcgcgcgtggcccgaggacctcgacgagttgccccgcaccgtcgaa
caaaccagcggcggtcacaccgtgcgcggctatccggctctggtcgacgcgggcggcgcc
gtcgacgtgcgggtgttcccgacggctgccgagcaggtggtggcgatggggccgggaacc
cgccgactgctgcgcctgtcggtgccgtcgcccgcgaagaccctcgagcgagcactggat
ccacgcgcacgcctgacgttgggcgccaacccggatgggtctcttgcggcgctgctcgac
gattgcgccgacgcggcgaccgaccggctcgcgccggaaccggcatggacgcgcgccgat
ttcaccgccctgcgagagcgggtcgctgcgcaactggtgccgacgacgcaggcgatcctc
ggtcaggtcgagaaggtgctcgccgtcgcccacgaggtggagctcgcgttgcccgccgat
cctgtacccgcgcaggccgacgcgatcgccgacattcgcgagcagctcggccgcctcctg
cccaagggtttcgtcaccatcacaggggcgggccggctcaccgacctcacccgttatctg
accgccatcgccaggcggctcgaccggctcccccactccgtcggggcggaccgtgagcgg
atggcccgcgtgcatgcggtccaggatgcgttcgacgatctcgtcggcgctctgtcaccc
gctcgcgcagcctccgatgacgtccgcgacatcgagcgccagatcgaggaactccgggtc
agcctgtgggcacaacagctcggcaccccgcgcccggtgagcgagcaacggatctaccgc
gcgatcgacggcattgcgccgtga
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