Mycolicibacterium moriokaense: MMOR_21310
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Entry
MMOR_21310 CDS
T06887
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmor
Mycolicibacterium moriokaense
Pathway
mmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMOR_21310 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmor03019
]
MMOR_21310 (deaD)
03009 Ribosome biogenesis [BR:
mmor03009
]
MMOR_21310 (deaD)
Enzymes [BR:
mmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MMOR_21310 (deaD)
Messenger RNA biogenesis [BR:
mmor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMOR_21310 (deaD)
Ribosome biogenesis [BR:
mmor03009
]
Prokaryotic type
rRNA helicases
MMOR_21310 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
CMS1
Cas_CT1975
LytR_C
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBX01195
UniProt:
A0AAD1H9C0
LinkDB
All DBs
Position
2131712..2133406
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AA seq
564 aa
AA seq
DB search
MTSSDPDESREDLTFDDLQIHPSVLRAIGDVGYESPSAIQAATIPPMMAGSDVVGLAQTG
TGKTAAFAIPILSKIDPGKKDTQALVLAPTRELALQVAEAFSRYGAHLPQINVLPVYGGS
SYGPQLAGLRRGAQVVVGTPGRVIDHLEKGTLDLTHLDYLVLDEADEMLQMGFAEDVERI
LADTPEYKQVALFSATMPPGIRKITKKYLHDAVEVAVKSKTATAENITQRYIQVAGPRKM
DALTRLLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQAQRERTITALKD
GSIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGQALLFVSPRE
RHMLKAIEKATRQQLTEAELPTVEDVNAQRVAKFRDSITDALTAPGFELFRRMIEDYERE
NDVPMVDIAAALAAQSRDGEQFLMKEPPPEKRRERPERTERDRERGPKQRKPGQGFATYR
IAVGKRHKVSPGAIVGAIANEGGLHRSDFGHISIRPDHSLVELPAKLSRDTVKALERTRI
QGILINLQPDRPPRKGGKSGHKSK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctccgacccggacgagagccgggaagatctgaccttcgacgacctgcagatt
cacccttcggtgctgcgggcgatcggcgacgtcggatacgaatccccttcggccatccaa
gccgccaccattccgcccatgatggccggctccgacgtcgtcggcctggcgcagaccggc
accggcaagaccgcagccttcgcgatcccgatcctgtcgaagatcgatcccggcaagaag
gacacccaggcgctggtgctggcgccgacgcgtgagttggcgttgcaggtcgcagaggcg
ttcagtcgctacggcgcccatctgccccagatcaacgtgctgccggtctacggcggctcg
tcctacggtccacaactggccggtctgcgacgcggcgcccaggtggtcgtcggtactccg
ggtcgggtgatcgaccacctcgagaagggcacgctcgatctcacccacctcgactatctg
gtgctcgacgaggccgacgagatgctgcagatgggcttcgccgaggacgtcgaacgcatc
ctcgccgacacccccgagtacaagcaggtggcgctgttctccgccacgatgccgcccggc
atccgcaagatcaccaagaaatatctgcacgacgccgtcgaggtggccgtcaaatcgaaa
acggccaccgcagagaacatcacgcagcgctacatccaggtcgccggtccgcgcaagatg
gacgccctgacccgtctcctcgaggtcgagccgttcgaggcgatgatcgtcttcgttcgc
accaagcaggccaccgaggaggtcgcggagaaactacgggcccgcggtttctcggcggcc
gcgatcaacggtgacatcccgcaggcgcaacgcgaacgcacgatcaccgcactcaaggac
ggcagcatcgacatcctggtggcgacggatgtcgcggcgcgcggtttggacgtcgaacgc
atctcgcacgtgttgaactacgacattccgcacgacaccgagtcctacgtgcaccgcatc
gggcgtaccggtcgcgcgggtcgctccgggcaggcgctgctgttcgtgtcgccgcgggaa
cggcacatgctcaaggcgatcgagaaggcgactcgtcaacagctcaccgaagccgaactg
cccacggtcgaggacgtcaacgcacagcgggtggccaagttccgcgattccatcaccgac
gcgctgaccgccccgggtttcgagttgttccggcggatgatcgaggactacgaacgcgag
aacgatgtcccgatggtcgacatcgccgccgcgctggccgcgcagtcgcgcgacggtgag
cagttcctgatgaaggaaccgccgccggagaagcgccgtgagcgccccgagcggaccgag
cgcgaccgcgagcgtgggccgaagcaacgcaaaccgggccaggggttcgcgacgtaccgg
atcgcggtgggcaagcggcacaaggtgagtcccggcgcgatcgtcggcgccatcgccaac
gagggcggtctgcaccgcagcgacttcggccacatctcgattcgccccgaccattcgctg
gtggagctgcccgccaagctgtcgcgtgacaccgtgaaagccttggagcgcacccgcatt
cagggcatcctgatcaatctccaacccgatcgtccgccgcgaaaaggcgggaaatccggc
cacaagtccaaatga
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