Mycolicibacterium moriokaense: MMOR_22120
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Entry
MMOR_22120 CDS
T06887
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mmor
Mycolicibacterium moriokaense
Pathway
mmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMOR_22120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmor03021
]
MMOR_22120 (rho)
03019 Messenger RNA biogenesis [BR:
mmor03019
]
MMOR_22120 (rho)
Transcription machinery [BR:
mmor03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MMOR_22120 (rho)
Messenger RNA biogenesis [BR:
mmor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MMOR_22120 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
FANC_SAP
Fungal_virus_P2_C
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BBX01276
UniProt:
A0AAD1M6F0
LinkDB
All DBs
Position
2216445..2218343
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AA seq
632 aa
AA seq
DB search
MTETDLITAGGSSSETEQLQNPVNSDISTQAAQEPSNSTPTAETAPTASPEKDVASGDRA
ASLTTMVLPELRALAKQIGVEGASGMRKSELVAAIRAHRGEANGASTKAPADTRQADAAP
EAPASETTATGSDDRTSGEQSDQQRPRRERRGASREPGAPGGSDQGGGGQDSKSDAEGDQ
NAKQRTKSEGDKADGDDQQGGQQNRNNQGSDDDGEGRQGRRGRRFRDRRRRERGGEGGGD
RDTELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGA
VRVPKDGEGGGQNPRQKFNPLVRLDTVNGGPVEDAKNRPEFTKLTPLYPNQRLRLETTPE
KLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITKNNPECHLMVVLVDERPEE
VTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYN
NASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEF
KGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDPHQA
IDLLMSQLRKTKNNYEFLVQVSKTAPGNMDVD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaacggacctgatcacggctggcggtagcagcagcgaaaccgaacagctgcag
aaccccgtgaattcagacatctcaactcaggcggctcaagagccgtcgaacagcacgcct
actgcggaaaccgccccgacggccagcccagaaaaggacgtcgcgtccggcgatcgtgcg
gcctcccttacgaccatggtgctgcccgaactgcgggcgctcgccaaacagatcggcgtc
gagggtgcctccggaatgcgcaagagcgaactggttgccgccatccgtgcgcaccgcggc
gaggccaacggcgcgtccacaaaggcgcccgcagacacccgccaggccgatgctgctcct
gaggccccggcttctgaaacgaccgcaaccggctccgacgaccggacctccggtgagcaa
tccgaccagcagcgtccacgccgcgagcgtcgcggcgcctcccgtgagcccggcgccccc
ggcggttccgatcagggcggtggcggtcaggacagcaagtccgacgccgagggcgatcag
aacgccaagcagcgcacgaagtccgagggcgacaaggccgacggcgacgaccagcagggc
ggtcagcagaaccgcaacaaccagggcagcgacgacgacggcgagggccgtcagggtcgt
cgcggtcgccgattccgggatcgcaggcgccgcgagcgcggcggcgagggcggcggagat
cgcgataccgagttgcgcgaggacgatgtcgtgcagcccgtcgcgggcatcctcgacgta
ctcgacaactacgcgttcgttcgcacgtcgggttacctggccggccccaacgacgtctac
gtgtccatgaacatggtccgcaagaacggcctgcgccgcggtgacgcggtcaccggcgcg
gtccgggtgccgaaggacggcgagggcggcggtcagaatccgcggcagaagttcaacccg
ctggtccgactggacaccgtcaacggcggacccgtcgaagacgcgaagaatcgccccgag
ttcaccaagctgaccccgctgtacccgaaccagcggctgcgcctggagaccactccggag
aagctgacgacccgtgtgatcgacctgatcatgccgatcggcaagggtcagcgcgccctg
atcgtgtcgccgccgaaggcgggcaagacgacgatcatgcaggacatcgccaacgcgatc
accaagaacaatccggaatgccatctgatggtcgtgctcgtcgacgagcgtccggaagag
gtgacggacatgcagcgctcggtcaagggtgaggtcatcgcctccactttcgaccgcccg
ccgtcagaccacacgcaggccgctgagctcgcgatcgagcgtgccaagcggctcgtcgag
cagggtaaggacgtcgtcgtgctgctcgactcgatcacccgcctcggccgcgcctacaac
aacgcgtccccggcgtcgggccgaatcctgtccggtggtgtcgactcgaccgcgctgtat
ccgcccaagcggttcctcggcgcggcccgcaacatcgaagagggcggctcgctgacgatc
atcgccaccgcgatggtggagaccggctcgaccggtgacacggtgatcttcgaggagttc
aagggcaccggtaacgccgagctcaagctcgaccgcaagatcgccgagcgtcgcgtcttc
ccggccgtcgacgtcaacccatccggcacccgtaaagatgagctgctgctctcgccggac
gagttcgcgatcgttcacaagctgcgtcgcgtgctgagcggactggacccccaccaggcc
atcgacctgctgatgagccagctgcgcaagaccaagaacaactacgagttcctggtacag
gtctccaagaccgcgcccggcaacatggacgtcgactga
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