Mycolicibacterium moriokaense: MMOR_26310
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Entry
MMOR_26310 CDS
T06887
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmor
Mycolicibacterium moriokaense
Pathway
mmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMOR_26310 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmor03019
]
MMOR_26310 (rne)
03009 Ribosome biogenesis [BR:
mmor03009
]
MMOR_26310 (rne)
Enzymes [BR:
mmor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MMOR_26310 (rne)
Messenger RNA biogenesis [BR:
mmor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMOR_26310 (rne)
Ribosome biogenesis [BR:
mmor03009
]
Prokaryotic type
rRNA processing factors
MMOR_26310 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBX01695
UniProt:
A0AAD1M6P1
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All DBs
Position
2651284..2654049
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AA seq
921 aa
AA seq
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MAASNTTRPGAKGDYVADDAQTEALSEETQPAEDVQPEELTVAVQAQQPEESVPDAGPET
STVAEAESEADEEPSAGADGDEPESRLMLEATAPAAPERADYQPLFMAPQPIRIDYDTDD
EDDDEDDTDDSGPDSDDEQADRPSGRRRRRGRRGRGRGRGEQNDDSDDSDAGQDSGDESD
ESDDSDEDSGDDETATGEGGTRRRRRRRRRKSGAGDDNDNGSSDDPPNTVVHEREPRKTK
NGKDGDGEIQGINGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERMMVVRDK
IRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIG
RGRNGVLYAGEVNWEAAGLGGANRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAG
RYLVYVPGASSTGISRKLPDTERQRLKEILREVVPPEAGVIIRTASEGVKEEDIRTDVNR
LQERWAQIEQKAAEVKEKAAGAAVALYEEPDVLVKVIRDLFNEDFTGLIVSGDEAWNTIN
EYVNSVAPELVPRMTKYEPAGPDAPDVFAVHRIDEQLTKAMDRKVWLPSGGTLVIDRTEA
MTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRD
LVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTTCAECGGRGILLHGD
PVDSTATGGRKTESGGRRGKRGKRGGKADDVAVAKVPPHPAGEHPMFKAMAAANGRHEDD
EDGTDAEKTAEEVAEVDSETIREAVAEAVDDDTDETDETEDDESDEDDIDLDDDDDEEDD
DIEVIGSDDDDDDESEDEDSDEDDSDEDDDEDDPDLDDEDSEEDDSDDEYDDVEPVRVAP
PGGRHRRRAAARPAGPPINEQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcgtcaaacacgacgcgcccgggggctaaaggagactacgtggccgacgatgcc
caaacagaagccctatcagaagaaactcagcccgcggaggacgttcagcctgaagagctg
accgtcgcggtgcaggcgcagcagcctgaggagtccgtccccgatgcggggccggagact
tcgacggtcgctgaagctgaatccgaggccgacgaggaaccctcggccggcgcagacggg
gacgaacccgaatcgcggctgatgctcgaggctaccgccccggccgctcccgagcgggcc
gattaccagccgctgttcatggctcctcagccgattcggatcgactacgacaccgacgat
gaggacgacgacgaggacgacaccgacgattccgggccggactccgacgacgagcaggcc
gaccggccgtccggccggcgtcggcgccgaggccgccgcggacgtggccggggtcgcggt
gagcagaacgacgactccgacgacagcgacgccggtcaggactccggcgatgaatcggac
gaatcggacgattccgacgaggacagcggcgacgacgagaccgcgacgggtgagggcggt
acgcgccgccgacgtcgccgtcgccgccgcaagtcgggcgcgggcgacgacaatgacaac
ggatcgtccgacgatccgccgaacaccgtcgtccacgagcgcgagccgcgcaagaccaag
aacggcaaggacggcgacggcgagatccagggcatcaacggatcgacccgcctggaggcc
aagcgccagcgtcgtcgcgacggccgggacgcgggacgtcgtcgtccgccgatcctgagc
gaggccgagttcctcgccaggcgcgaagccgtcgagcggatgatggtcgtgcgcgacaag
atccgcaccgaaccaccgcacgagggggcgcgctacacccagatcgccgtgctcgaagac
ggcgtcgtcgtcgagcatttcgtgacgtcggcggcgtcggcgtcgctggtcggcaacatc
tatctcggcatcgtgcagaacgtgttgccgtcgatggaggcggcgttcgtcgacatcggc
cgtggccgcaacggcgtgctctacgcgggcgaggtgaactgggaggcggccggtctcggc
ggtgcgaaccggaagatcgaacaggccctcaagcccggcgactacgtcgtcgtccaggtc
agcaaggacccggtggggcacaagggcgcacggttgacgactcaggtgtcgctggccggg
cggtacctcgtttacgtgcccggcgcgtcgtcgacggggatcagccgcaagctgcccgac
accgaacggcagcgcctcaaggagatccttcgcgaggtcgtgccgccggaggcgggcgtg
atcatccgcaccgcatccgagggcgtcaaggaagaagacatccgcaccgacgtcaatcgg
ctgcaggagcgctgggcgcagatcgagcagaaggccgccgaggtcaaggagaaggcggct
ggcgcggccgtcgcgctctacgaagagcccgacgtgctggtcaaggtcatccgcgacctg
ttcaacgaggacttcaccggcctcatcgtgtccggcgacgaggcgtggaacaccattaac
gagtatgtgaattcggttgcgcccgaactcgttccacgcatgacgaagtacgagcccgcg
gggcccgacgcgccggacgtgttcgcggtgcaccgcatcgacgagcagctgacgaaggcc
atggaccgcaaggtgtggctgccgtcgggcggcacgctggtcatcgatcgcaccgaagcg
atgacggtggtcgacgtgaacaccggcaagttcaccggttcaggcggcaacctcgagcag
acggtcacgcgcaacaacctcgaggccgccgaagagatcgtgcgccagctgaggctgcgc
gatatcggcggcatcgtcgtcatcgacttcatcgacatggtgctcgagtccaaccgcgac
ctggtgctgcgccgactgaccgaagcattggcgcgggaccgcacccgccaccaggtttcc
gaggtgacgtcgctggggttggtgcagctgacgcgcaagcgtctgggcacgggtctgatc
gaggcgttctccacgacctgcgcggaatgcggcggcaggggaatcctgctgcacggcgat
ccggtggactcgacggccacgggcgggcgcaagaccgagtcgggcggacggcgcggcaag
cgcggcaaacgcggcggtaaggccgacgacgtcgccgtcgccaaggtgccgccgcatccc
gcaggcgagcacccgatgttcaaggcgatggccgcggccaacggtcgccacgaggacgac
gaggacggcacggacgcggagaagaccgccgaggaggtcgccgaggtcgattcggagacc
atccgcgaggccgtcgccgaggcggtggacgacgacaccgacgagaccgacgagaccgag
gacgacgagtccgatgaggacgacatcgacctcgacgatgacgatgacgaggaagacgac
gacatcgaggtcatcgggtccgacgacgacgatgatgacgagtccgaggatgaggactcc
gatgaggacgactccgatgaggacgacgatgaggacgaccccgacctggacgatgaggac
tccgaggaggacgactccgacgacgaatacgacgacgtcgagccggtccgggtagccccg
ccgggcggtcggcaccggcggcgcgccgccgccaggcccgccggaccgcccatcaacgag
cagtga
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