Mycolicibacterium moriokaense: MMOR_40700
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Entry
MMOR_40700 CDS
T06887
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mmor
Mycolicibacterium moriokaense
Pathway
mmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMOR_40700 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmor03019
]
MMOR_40700 (rnj)
Messenger RNA biogenesis [BR:
mmor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMOR_40700 (rnj)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBX03134
UniProt:
A0AAD1HDS1
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Position
complement(4107806..4109485)
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AA seq
559 aa
AA seq
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MNEELAPPGPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPTHDEPGVDLI
LPDLRLIQDRLDDVEALVLTHAHEDHIGAIPFLLKLRADIPVVGSKFTLALVAEKCREHR
IKPVFQEVDAGQSSTHGVFECEYFTVNHSIPGCLAIAIHTGAGTVLHTGDIKLDQSPPDG
KPTDLPGMSRLGDAGVDLFLCDSTNAEIPGVGPSESEIGPNIHRLLRGAQGRVIVACFAS
NVGRVQQIIDASVALGRKVAFVGRSMVRNMGIAKELGYLTLENDDDIIDIGAAEMMPPER
VVLVTTGTQGETMAALSRMSRGEHRSITLTPGDLIIMSSSQIPGNEEAIFGVLDALAKIG
ARVVTNAHVRVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAGLAARTGVPEEN
IVLAENGVSVDLVAGRASIAGAVSTGKMFVDGLVSGDVGETVVGERLTLSSGFIGITVVV
RSGTGKMAAPPHLHSRGFSEDPKSLEPATRKVAEALEALAAERVTDVARIAQAARRAVGK
WVGETYRRQPMIVPTVIEI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaagaactcgcgccaccggggccactggccccagggggcctgcgggtgacggcg
ctgggcggtatcagcgaaatcggccgcaacatgacggttttcgagcatctgggccggctc
ctgatcgtcgactgcggggtgttgttccccacgcatgacgagccgggggtggacctgatc
ctgccggatctgcgcctgatccaggatcgcctcgacgatgtggaggcgctcgtgctgacc
cacgcgcacgaggaccacatcggtgcgatcccgttcctgctcaagctgcgggcggacatc
cccgtcgtcgggtcgaagttcacgctggcgctggtggcggagaagtgccgcgaacaccgc
atcaagccggtgttccaggaggtggacgccgggcagagttccacgcacggcgtcttcgaa
tgcgaatatttcaccgtcaaccattcgattcccggctgcctggccatcgcgattcacacc
ggggccggcacggtgctgcataccggtgacatcaagctcgaccagtcgccgcccgacggt
aagcccaccgatctgccgggcatgtcgcggctcggggatgccggtgtggatctgttcctg
tgcgattcgacgaacgccgagatcccgggcgtcggtccgtcggagagtgagatcggcccg
aacatccatcggctgctgcgcggggcgcagggccgggtcatcgtggcctgcttcgcatcg
aatgtcggccgtgtgcaacagatcatcgacgcctcggtcgcgttgggccgcaaggtggcg
ttcgtcggccggtcgatggtccgcaacatggggatcgcgaaggaactcgggtatctgacg
ctcgagaacgacgacgacatcatcgacatcggcgccgcggagatgatgccgcccgaacgc
gtcgtgttggtgaccaccggcacccagggcgagacgatggccgctctgtcgcggatgtcg
cgcggcgagcaccgcagcatcacgctgacgcctggcgatctcatcatcatgtcgtcgtcg
cagatacccggcaacgaggaagcgatcttcggcgtgctggatgcgttggcgaagatcggt
gcgcgcgtcgtgacgaacgcccatgtccgcgtgcatgtctcggggcacgcgtatgccggg
gagctgctcttcctctacaacggcgtgcggccacgcaacgtgatgccggtgcacggcacc
tggcggatgctgcgcgccaacgccgggttggcggcgcgcacgggtgtgccggaggagaac
atcgtgctggcggagaacggcgtcagcgtcgacttggtcgcgggccgggcgtcgatcgcg
ggtgcggtgtcgacggggaagatgttcgtcgacgggctcgtcagcggggacgtcggtgaa
acggtcgtcggtgaacggctcacgctgtcttcgggtttcatcgggatcacggtcgtggtg
cgcagcggcacaggcaagatggcggccccgccgcacctgcactcacgcggtttctcggag
gatccgaagtcgctggaacccgccactcgtaaggtcgcggaagcgctggaagcccttgcc
gcggaacgggtcaccgacgtcgcacggatcgctcaggccgcgcggcgcgcggtcgggaaa
tgggtcggcgagacgtatcgccgccagccgatgatcgtgccgacggtcatcgagatctag
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