KEGG   Mycolicibacterium moriokaense: MMOR_40700
Entry
MMOR_40700        CDS       T06887                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mmor  Mycolicibacterium moriokaense
Pathway
mmor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MMOR_40700 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmor03019]
    MMOR_40700 (rnj)
Messenger RNA biogenesis [BR:mmor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MMOR_40700 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BBX03134
UniProt: A0AAD1HDS1
LinkDB
Position
complement(4107806..4109485)
AA seq 559 aa
MNEELAPPGPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPTHDEPGVDLI
LPDLRLIQDRLDDVEALVLTHAHEDHIGAIPFLLKLRADIPVVGSKFTLALVAEKCREHR
IKPVFQEVDAGQSSTHGVFECEYFTVNHSIPGCLAIAIHTGAGTVLHTGDIKLDQSPPDG
KPTDLPGMSRLGDAGVDLFLCDSTNAEIPGVGPSESEIGPNIHRLLRGAQGRVIVACFAS
NVGRVQQIIDASVALGRKVAFVGRSMVRNMGIAKELGYLTLENDDDIIDIGAAEMMPPER
VVLVTTGTQGETMAALSRMSRGEHRSITLTPGDLIIMSSSQIPGNEEAIFGVLDALAKIG
ARVVTNAHVRVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAGLAARTGVPEEN
IVLAENGVSVDLVAGRASIAGAVSTGKMFVDGLVSGDVGETVVGERLTLSSGFIGITVVV
RSGTGKMAAPPHLHSRGFSEDPKSLEPATRKVAEALEALAAERVTDVARIAQAARRAVGK
WVGETYRRQPMIVPTVIEI
NT seq 1680 nt   +upstreamnt  +downstreamnt
gtgaacgaagaactcgcgccaccggggccactggccccagggggcctgcgggtgacggcg
ctgggcggtatcagcgaaatcggccgcaacatgacggttttcgagcatctgggccggctc
ctgatcgtcgactgcggggtgttgttccccacgcatgacgagccgggggtggacctgatc
ctgccggatctgcgcctgatccaggatcgcctcgacgatgtggaggcgctcgtgctgacc
cacgcgcacgaggaccacatcggtgcgatcccgttcctgctcaagctgcgggcggacatc
cccgtcgtcgggtcgaagttcacgctggcgctggtggcggagaagtgccgcgaacaccgc
atcaagccggtgttccaggaggtggacgccgggcagagttccacgcacggcgtcttcgaa
tgcgaatatttcaccgtcaaccattcgattcccggctgcctggccatcgcgattcacacc
ggggccggcacggtgctgcataccggtgacatcaagctcgaccagtcgccgcccgacggt
aagcccaccgatctgccgggcatgtcgcggctcggggatgccggtgtggatctgttcctg
tgcgattcgacgaacgccgagatcccgggcgtcggtccgtcggagagtgagatcggcccg
aacatccatcggctgctgcgcggggcgcagggccgggtcatcgtggcctgcttcgcatcg
aatgtcggccgtgtgcaacagatcatcgacgcctcggtcgcgttgggccgcaaggtggcg
ttcgtcggccggtcgatggtccgcaacatggggatcgcgaaggaactcgggtatctgacg
ctcgagaacgacgacgacatcatcgacatcggcgccgcggagatgatgccgcccgaacgc
gtcgtgttggtgaccaccggcacccagggcgagacgatggccgctctgtcgcggatgtcg
cgcggcgagcaccgcagcatcacgctgacgcctggcgatctcatcatcatgtcgtcgtcg
cagatacccggcaacgaggaagcgatcttcggcgtgctggatgcgttggcgaagatcggt
gcgcgcgtcgtgacgaacgcccatgtccgcgtgcatgtctcggggcacgcgtatgccggg
gagctgctcttcctctacaacggcgtgcggccacgcaacgtgatgccggtgcacggcacc
tggcggatgctgcgcgccaacgccgggttggcggcgcgcacgggtgtgccggaggagaac
atcgtgctggcggagaacggcgtcagcgtcgacttggtcgcgggccgggcgtcgatcgcg
ggtgcggtgtcgacggggaagatgttcgtcgacgggctcgtcagcggggacgtcggtgaa
acggtcgtcggtgaacggctcacgctgtcttcgggtttcatcgggatcacggtcgtggtg
cgcagcggcacaggcaagatggcggccccgccgcacctgcactcacgcggtttctcggag
gatccgaagtcgctggaacccgccactcgtaaggtcgcggaagcgctggaagcccttgcc
gcggaacgggtcaccgacgtcgcacggatcgctcaggccgcgcggcgcgcggtcgggaaa
tgggtcggcgagacgtatcgccgccagccgatgatcgtgccgacggtcatcgagatctag

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