Mycolicibacterium moriokaense: MMOR_54570
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Entry
MMOR_54570 CDS
T06887
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mmor
Mycolicibacterium moriokaense
Pathway
mmor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMOR_54570 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmor03021
]
MMOR_54570 (rpoB)
03400 DNA repair and recombination proteins [BR:
mmor03400
]
MMOR_54570 (rpoB)
Enzymes [BR:
mmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMOR_54570 (rpoB)
Transcription machinery [BR:
mmor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMOR_54570 (rpoB)
DNA repair and recombination proteins [BR:
mmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMOR_54570 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
BBX04521
UniProt:
A0AAD1HHW5
LinkDB
All DBs
Position
complement(5534400..5537885)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAGSRQSKSAVATNNSVPGAPNRISFAKLREPLEVPGLLDVQTESFEWLIGSDRWRENAK
LRGDAIEPVGGLEEVLTELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTYAAPLF
VTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDESIDKS
TEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIVERFGF
SEIMMGTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRY
KVNKKLGLNAGQPITSSTLTEEDVVATIEYLVRLHQGDQTMTAPGGVEVPVEVDDIDHFG
NRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEGPNI
GLIGSLSVYARVNPFGFIETPYRKVKDGVVTDDIEYLTADEEDRHVVAQANSPTDEKGRF
LEERVLVRRKGGEVEFVSATEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQ
AVPLVRSEAPLVGTGMELRAAIDAGDVVVADKAGVIEEVSADYITVMADDGTRHTYRMRK
FARSNHGTCANQRPIVDAGDRVEAGQVIADGPCTENGEMALGKNLLVAIMPWEGHNYEDA
IILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGA
EVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFS
REDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPDGTPVD
IILNTHGVPRRMNIGQILETHLGWAAKAGWKIEGNPDWAANLPEEMHEVEPNTIVSTPVF
DGAREEELQGLLSSTLSNRDGDTLVDGDGKAQLFDGRSGEPFPYPVTVGYMYILKLHHLV
DDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTV
GRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLER
AAANLGINLSRNESASVEDLA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggcagggtcccgccaatccaagtcagcagtagcaaccaataactccgtaccaggagca
ccaaaccgaatttcctttgcaaagctccgtgagccgctcgaggttccggggctacttgac
gttcagaccgagtctttcgagtggctgatcggatcggatcgctggcgcgagaacgccaag
ctccgcggcgacgccatcgagcccgtcggcggcctcgaagaggtgctgaccgagctctcg
ccgatcgaggacttctcgggttctatgtcgctgtcgttctccgacccgcgcttcgacgag
gtaaaggccccggtcgacgagtgcaaagacaaggacatgacgtacgcggcgccgctattc
gtcaccgccgagttcatcaacaacaacaccggtgagatcaagagtcagacggtcttcatg
ggcgacttcccgatgatgaccgagaagggcaccttcatcatcaacggcacggagcgtgtc
gtggtgtcccagctggtccgctcgcccggtgtgtacttcgacgagagcatcgacaagtcc
accgagaagacgctgcacagcgtcaaggtgatccccggccgcggtgcgtggctggagttc
gacgtcgacaagcgcgacaccgtcggtgtgcgtatcgaccgcaagcgtcgtcagccggtc
accgtgctgctgaaggcgctgggctggaccaacgagcagatcgtggagcgcttcggcttc
tccgagatcatgatgggcacgctggagaaggacaacaccgcaggcacggacgaggcgctg
ttggatatctaccgcaagctgcgcccgggcgaaccgccgaccaaggagtccgcgcagacc
ctgctggagaacctgttcttcaaggagaagcgctacgacctggcccgcgtcggccgctac
aaggtgaacaagaagctgggcctcaacgccggccagccgatcaccagctcgacgctgacc
gaagaggacgtcgtcgccaccatcgagtatctggtgcgcctgcatcagggcgatcagacg
atgaccgctcccggcggcgtcgaggtccccgttgaggtcgacgacatcgaccacttcggc
aaccgtcgtctgcgtaccgtcggcgagctgatccagaaccagatccgggtgggcctgtcc
cgcatggagcgcgtcgtgcgcgagcggatgacgactcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccgtcccgtcgtggcggccatcaaggagttcttcggcaccagc
cagctctcccagttcatggaccagaacaacccgctgtcgggcctgacccacaagcgtcgt
ctctcggcgctgggccccggcggtctgtcccgtgagcgtgccggcctcgaggtgcgcgac
gtgcactcgagccactacggccgcatgtgcccgatcgagacgccggaaggcccgaacatc
ggcctgatcggctcgctgtcggtgtacgcgcgggtgaacccgttcggcttcatcgagacg
ccctaccgcaaggtcaaggacggtgtcgttacggatgacatcgagtacctgaccgccgac
gaggaggaccgccacgtcgtggcgcaggccaactcaccgaccgacgagaagggccgcttc
ctcgaggagcgtgtcctggttcgccggaagggcggcgaggtcgagttcgtgtcggcgacc
gaggtcgactacatggacgtgtcgccgcgccagatggtgtcggtcgcgacggccatgatt
ccgttcctcgagcacgacgacgccaaccgcgccctgatgggtgcgaacatgcagcgccag
gcggttccgctggtccgcagcgaggcgccgctcgtcggcaccggcatggagctgcgtgcc
gcgatcgacgccggtgacgtcgtcgtcgccgacaaggcgggcgtcatcgaagaggtctcc
gccgactacatcaccgtgatggccgacgacggcacccggcacacctaccggatgcgcaag
ttcgcgcggtccaaccacggcacctgcgccaaccagcgcccgatcgtcgacgccggcgat
cgcgtggaggccggccaggtgatcgccgacggtccctgcaccgagaacggcgagatggca
ctgggcaagaacctgctcgtggcgatcatgccgtgggagggtcataactacgaagacgcg
atcatcctctccaaccgtctggtggaagaggacgtgctcacctcgattcacatcgaggag
cacgagatcgatgctcgcgacaccaagctgggcgccgaggagatcacccgggacatcccg
aacgtctccgatgaggtgctggccgacctcgacgagcgcggcatcgtccgcatcggcgcg
gaggtccgcgacggcgacattctggtcggcaaggtcaccccgaagggtgagaccgagctg
accccggaggagcggctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgcgac
acgtcgctcaaggtgccgcacggtgagtccggcaaggtcatcggcatccgcgtgttctca
cgtgaggatgacgacgagctgcccgccggcgtcaacgagttggtccgcgtctacgtcgcg
cagaagcgcaagatctccgacggcgacaagctggccggacgccacggcaacaagggcgtc
atcggcaagatcctgcccgtcgaggacatgcccttcctgcccgacggcacgcccgtcgac
atcatcctgaacacgcacggcgtgccgcgacggatgaacatcggccagatcctggagacc
cacctcgggtgggcggccaaggccggctggaagatcgagggcaatccggactgggcggcc
aacctgcccgaggagatgcacgaggtcgagccgaacaccatcgtctcgacgccggtgttc
gacggtgcccgcgaggaggagctgcagggtctgctgtcctcgacgctgtccaaccgcgac
ggcgacacgctcgtcgacggcgacggcaaggcgcagttgttcgacggccgcagtggtgaa
ccgttcccgtacccggtgacggtcggctacatgtacatcctgaagctgcaccacctggtc
gacgacaagatccacgcccgctcgaccggcccgtactcgatgatcacccagcagccgctg
ggcggtaaggcgcagttcggtggtcagcgattcggcgagatggagtgctgggccatgcag
gcctacggcgcggcgtacacgctgcaggagctcttgaccatcaagtccgacgacaccgtc
ggtcgcgtcaaggtctacgaggcgatcgtcaagggcgagaacatccccgagccgggcatt
cccgagtcgttcaaggtgcttctcaaagagcttcagtcgctgtgcctcaacgtcgaggtg
ctgtcgtcggacggtgccgcgatcgagatgcgcgacggcgatgacgaggacctggagcgc
gctgccgcgaatctgggaatcaacctgtcccgcaatgaatctgcgtccgttgaggacttg
gcctaa
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integrated database retrieval system
