Methylomonas montana: QZJ86_05165
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Entry
QZJ86_05165 CDS
T09581
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mmot
Methylomonas montana
Pathway
mmot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QZJ86_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmot03019
]
QZJ86_05165
Enzymes [BR:
mmot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QZJ86_05165
Messenger RNA biogenesis [BR:
mmot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QZJ86_05165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
UvrD-helicase
AAA_22
HI1480
Motif
Other DBs
NCBI-ProteinID:
WKJ91526
LinkDB
All DBs
Position
complement(1070079..1071218)
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AA seq
379 aa
AA seq
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MPFSNLGLSEALLKAIADSGYTTPTPIQAKAIPAVLTGRDLLAAAQTGTGKTAGFTLPIL
QRLAQTDYGRNRPVRALILTPTRELAAQVSESVLKYGAHQQPRLKSEVVFGGVKINPQMM
RLRGGVDILTATPGRLLDLVSQNAVKLDKVEMLVLDEADRMLDMGFIKDIRRILALLPKK
RQNLLFSATFSADIRKLTSDLLVNPVKIEVAVENATADTIDQLVYTVNKTAKTALLTHLV
KTKNWQQVLVFTSTKHGANKLTEKLNVADIKAAAIHGNKSQGARTSALAGFKAGDIRVLV
ATDVAARGIDIAQLPHVVNFELPRSSADYVHRIGRTGRAGQNGQAISLVSQDEYQALRLV
EKLIGAQIPREQIAGFSSL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgccattttccaatctcggtttatccgaggctttattaaaagcaatcgccgattccggc
tacaccacacccactccgattcaagctaaagccatacccgccgttttaaccggacgcgat
ttactggccgccgcccaaaccggcaccggcaaaaccgctggctttaccttgccgattttg
cagcgcttggcgcaaaccgactatggccgcaatcgcccggtacgcgcattgattttaacc
ccgacccgcgaactggccgcccaagtcagcgaatccgtactgaaatacggcgcacatcaa
cagccgcgtttaaaatcggaagtggtcttcggcggggtgaaaatcaatccgcagatgatg
cgtttacgtggcggcgtcgatattttaacggccacacccggccgactattggacttggtc
agtcaaaatgccgtcaagctggataaagttgaaatgttggtgctggacgaagccgatcgc
atgctggatatgggtttcatcaaagatatccgtagaattctggccttattgcctaaaaaa
cgccaaaacctgctgttttcggcgacattttccgccgacatccgcaaactgaccagtgac
ctgctggtaaatccggtcaaaatagaagtcgccgtcgaaaacgccactgccgacacgata
gaccagctcgtgtatacagtaaataaaaccgccaaaacagctttgttgacccatctggtt
aaaaccaaaaactggcaacaagtgctggtgtttaccagcaccaaacatggcgccaacaag
ctcaccgaaaaactcaacgtcgccgacatcaaagcggccgccattcacggcaataaaagt
caaggagccagaaccagtgccttggccggctttaaagcgggtgacattcgggtgttggta
gccaccgatgtggcagcacgcgggatcgatatcgctcagttgccacatgtggttaatttt
gagctgccgcgctcttcagccgattatgtgcacagaattggcagaaccgggcgcgcgggg
caaaatggccaagcgatttctttggtatcccaggacgaatatcaagccttgaggctggtt
gaaaaactgataggggcgcaaatacctcgtgagcagatagcaggctttagctccctatag
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