Methylomonas montana: QZJ86_11700
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Entry
QZJ86_11700 CDS
T09581
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mmot
Methylomonas montana
Pathway
mmot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QZJ86_11700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmot03021
]
QZJ86_11700
Transcription machinery [BR:
mmot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QZJ86_11700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
OKR_DC_1_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WKJ88688
LinkDB
All DBs
Position
2531527..2532786
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AA seq
419 aa
AA seq
DB search
MSNIAALPRVNETDSAIDTDSGTLAVQMGQARQRLVLLLLENNHANELISKKFFGALNNG
SDYSELMVAKNSEDSKKLLDWFASSRIAETNPAERPTEYGADLKPVQDRHIVQLSKPDIS
EQNPASTSLNQLLYGAHLLPVFLVDVASQAEQQLLADGLGSQDYQIQLKQASRELKTLRQ
QMINANTGLVAFVAYKYKTSNLSFDDLMQEGLVGLIKAVDRFDPERGICFSTYAIYWIKQ
AISRLIVKQEKIVRLPVALAEKAATVFDAMRTCYLRYERWPGIAELKACCDLSEQEIKTI
SSYYQATHSLDAVIGDEDDNLGLMAKMQQRQFSLPLDELIDKDLAQYVDKAVASLPEKQA
AILTMRFGLRDHTEMTLQAVADQLHVTRERVRQIQNEALKKLKQQFGFDLMLFLEPKDG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatagccgcattaccccgcgttaacgagacagattcggcaatcgatacagat
tccggcacgcttgccgtgcaaatgggacaagccagacagcgactggtactgttattactt
gaaaataatcacgctaacgaactgatttcaaaaaagttttttggcgccctcaacaacggc
tcagattattctgagttgatggtcgctaaaaactctgaagactccaaaaaactgctggat
tggttcgccagcagtcgtatcgccgagaccaatcccgccgaacggccgacggaatatggc
gcagatttaaaacctgtgcaagatcggcatatcgtacaactttccaagccggacataagc
gaacaaaatccggcttcgacatcgcttaatcaattgttgtacggcgcgcatttgttaccg
gtgtttttggtggatgtcgcaagccaggctgaacaacagttgcttgcggacggtttagga
agccaggattaccaaattcagctcaaacaagccagccgcgagttgaaaacgctacgtcag
caaatgataaatgccaataccggcttggtggctttcgtcgcttataaatataaaaccagc
aatctgagtttcgacgacttgatgcaggaaggattggtgggattaatcaaagccgtggac
agattcgatccggagcgcggcatttgcttctccacatatgccatctattggatcaaacaa
gccatctcccggctgatcgtcaaacaagaaaaaatcgtgcgattaccggttgcgttggcc
gaaaaagccgcgaccgtgttcgatgccatgcgtacttgttatctccgatatgagcgttgg
cccggcatcgccgaacttaaagcgtgctgcgatttatcggagcaggaaatcaaaaccatc
agcagttactaccaagccacgcattccctggacgccgttatcggcgatgaagacgataat
ctgggtttaatggcaaaaatgcagcagcgccaattcagcctaccgcttgatgaactaatc
gacaaggacttagctcaatatgtcgacaaagcagtggcctcgttaccggaaaaacaggcc
gcgatcctgaccatgcgtttcggtctgcgcgatcacacggaaatgacgctgcaagccgta
gcggaccaactgcatgttactcgggagagagtcaggcaaattcaaaacgaagccttaaaa
aaactgaaacaacagtttggatttgaccttatgctatttctcgaacccaaggatggctaa
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