Methylomonas montana: QZJ86_12535
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Entry
QZJ86_12535 CDS
T09581
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mmot
Methylomonas montana
Brite
KEGG Orthology (KO) [BR:
mmot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmot03009
]
QZJ86_12535 (dbpA)
Enzymes [BR:
mmot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QZJ86_12535 (dbpA)
Ribosome biogenesis [BR:
mmot03009
]
Prokaryotic type
rRNA helicases
QZJ86_12535 (dbpA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WKJ88848
LinkDB
All DBs
Position
2701582..2703012
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AA seq
476 aa
AA seq
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MNTITPAIPSSASANTAESSFHTLPLSADMLATLQQLEYLTMTPIQAASLPIALDGHDLI
AQAKTGSGKTAAFGLTLLNNLNPRRFAVQALVLCPTRELAEQVTQEIRRLARFADNIKIL
SLCGGTPLRPQAASLEHGVHIVVGTPGRIIDHLSRGSLQLDALNTLVLDEADRMLDMGFY
DDIASVAKQCPAGRQTLLFSATYPEGIARLASQFLRHPQEVKLPEQHQDDKIRQRFYEVT
DRERLKAVAVLLKHYRPISTLAFCNTKQQCRDLLEVLHAQGFHALTLNGDLEQRERDQVL
IQFANRSCSVLVATDVAARGLDIAQLEAVINVDITPDPEIHIHRIGRTGRADENGWALSL
VGPAEQRRVSAIAQQMNIDPDWHSLAALQNTDAAPLTPPMATLLILGGRKDKIRPGDVLG
ALTGEAGFNAEQVGKITVTDQTTFVAVTRDIARDAVRKLSAGKLKGKPVKVRILKD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaatactatcaccccagctatcccctcctcagcctcggcaaacacagcagagagttct
ttccataccctgccgctgtcagcggatatgctggccactttgcagcagcttgaatatctg
acgatgacgccgattcaggccgccagcctgccgatcgcattggacggccacgacctgatc
gcccaggcaaaaaccggtagcggcaaaactgctgcattcgggctgactttgttgaacaac
cttaacccacgccggtttgcggtccaggccttggtgttgtgcccgacccgcgaactggcc
gaacaggtcacgcaggaaatccgccgactggcccggtttgccgacaatattaaaatcctc
tcgttatgcggcggcacaccgctgcggccgcaagcggccagtctcgagcacggcgtccat
atcgtggtaggcacaccgggccgcatcatcgatcatttgagccgcggcagtctgcaactg
gacgcattgaataccctggtactggacgaagccgaccggatgctggacatgggcttttac
gatgatatcgcctcggtggcaaaacaatgccccgccggccgccaaaccctgctgttctcc
gccacctatccggaaggcatcgccagactggccagccagtttctgcgccatcctcaggaa
gtgaaactgccggaacagcatcaggatgacaagattcgccagcgcttctacgaggtaaca
gaccgtgagcggcttaaggccgtcgccgtgttgctcaaacattatcgtccgattagcacc
ctggccttctgcaacaccaaacagcaatgccgcgacttgcttgaggtcctgcatgcccaa
ggttttcatgcattgactttgaatggcgatttggaacagcgggagcgggatcaggtactg
attcagttcgccaatcgcagttgctcggtgctggtggcgactgacgtggcggcgcgcggg
ctggacatcgctcaactggaagcggtgatcaacgtcgacatcacgcccgatccggaaatc
cacattcatcgcatcggccgcaccggccgcgccgatgaaaacggctgggcgctgagcctg
gttggccccgccgagcagcggcgagtgtccgccatcgcccagcagatgaatatcgatccg
gattggcacagcctggcggcgctgcaaaatactgatgccgcaccgttaacaccgccaatg
gcgacgctgctgatactgggagggcgcaaggacaaaatccgccccggcgacgtgctggga
gcattgaccggcgaagccggcttcaatgccgaacaagtaggcaagatcaccgtcaccgat
caaaccacctttgtggcggtcacccgcgacattgcccgcgacgcagtgcgcaaactatcg
gccggcaaactgaagggtaaaccggtgaaagtgcggatattgaaggattga
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