Methylomonas montana: QZJ86_20225
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Entry
QZJ86_20225 CDS
T09581
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmot
Methylomonas montana
Pathway
mmot03030
DNA replication
mmot03410
Base excision repair
mmot03420
Nucleotide excision repair
mmot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QZJ86_20225 (polA)
03410 Base excision repair
QZJ86_20225 (polA)
03420 Nucleotide excision repair
QZJ86_20225 (polA)
03440 Homologous recombination
QZJ86_20225 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmot03032
]
QZJ86_20225 (polA)
03400 DNA repair and recombination proteins [BR:
mmot03400
]
QZJ86_20225 (polA)
Enzymes [BR:
mmot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QZJ86_20225 (polA)
DNA replication proteins [BR:
mmot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QZJ86_20225 (polA)
DNA repair and recombination proteins [BR:
mmot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QZJ86_20225 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QZJ86_20225 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WKJ90309
LinkDB
All DBs
Position
4376193..4378979
Genome browser
AA seq
928 aa
AA seq
DB search
MSDSAPNKLILVDGSSFLFRAFHAVPPLTNAQGEPTNAVYGVSNMLRKLINDYGTPYFAV
VFDAPGKTFRHDLYDQYKAHRPPMPDDLRVQIAPLHDLIRSLGLPLIIEHGVEADDVLGS
LAQNAARQGFEVIISTGDKDMAQLVNEQITLENTMTNTRMDIQGVQDKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQEYGTLDNLIARADEIKGKIGDNLREALGQLPLSR
ELTTIKCDVALHYSLDELKRKAPDIASLKDQLGHLGFSSWLKTLNGDGSTPSPEGEGGVR
GNAKNDSSESSIQPSPVGEKEPKAALARDYQTILSQADFDAWLDKLKQAELFAFDTETTS
LNYSDAQIVGVSFAVEAGQAAYLPVAHDYPGAPAQLDRQTVLDALKPLLEDPNKAKLGQN
LKYDSHVLVNHGIALRGIQHDTMLESYVLNSTATKHNMDDLAKRYLGVETIHFEDVAGKG
AKQIGFAEVAIEQASEYAAEDADITLRLHQTLSEQLQQHPRLWALYNEIEVPLISVLARI
EENGVLIDSAMLAQQSLELANRMIGIEQQAHDLAGSAFNLGSPKQIQEILYDRLNLPVLK
KTPKGQPSTDESVLQELAVDYALPKLILDFRGMSKLKSTYTDKLPQQVNDRTGRVHTSYH
QAVAATGRLSSSDPNLQNIPIRSEEGRKIRQAFIAPPGYKIVAADYSQIELRIMAHLSGD
AGLLAAFSQGVDVHSATAAEVFEVELEQVTHDLRRSAKAINFGLIYGMSAFGLAQQLGLP
RNQAQAYIDLYFSRYPGVKQYMDTTRELAKQQGYVETIFGRRLYLPEINSRNAAMRQYAE
RTAINAPMQGTAADIIKRAMLACDTWITADSPDVKMIMQVHDELVFEVAEAQLTDHVETI
RGIMSGAAELHVPLLVEVGSGENWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccgctcctaacaaactgatcctggtcgacggctcgtcgtttctatttcgc
gcctttcacgcggtgccaccgctgaccaatgcgcagggcgagccgaccaacgctgtttac
ggcgtctccaacatgctgcgcaagctgatcaacgattacggcacgccctattttgccgtg
gtgttcgatgcgccgggcaagacttttcgccacgatttgtacgatcaatacaaagcccat
cgaccaccgatgccggacgatctgcgggtgcaaattgcgcccttgcacgacttgattcgc
tcgctgggtttgccgttgattatcgaacacggcgtggaagcggacgacgtgctgggcagc
ctggcgcagaacgccgctcgacaaggctttgaggtgataatttccaccggcgacaaggac
atggcgcagttggtgaacgagcaaatcaccctggaaaacaccatgaccaacacccgcatg
gatattcagggtgtgcaggacaaattcggcgtaaagccggagcagatcatcgattatctg
gcgctgatgggcgatgcggtggacaacattcccggcgtaccgaaagtcgggccgaaaacc
gccgccaagtggttgcaggaatacggcacgctggacaatttgatcgcccgcgccgacgag
atcaagggcaagatcggcgacaatttgcgcgaagccttgggccagttgccgctgtctcgc
gagctgaccaccatcaaatgcgacgtggccttgcattacagtctggacgaattaaagcgc
aaggcaccggacattgcctcccttaaagaccaactgggccatttgggctttagcagttgg
ctgaaaaccttgaacggcgatggctcaactccctctccagagggagagggtggggtgagg
ggaaatgcaaaaaacgattcttcggaatcctcaatccagccttctcccgttggagagaag
gagccgaaagctgcgctagcgagggattaccaaaccatcctcagccaagccgatttcgat
gcctggctggataagctcaaacaagccgagttgttcgcattcgacaccgaaaccaccagt
ctgaattacagcgatgcgcaaatcgtcggcgtgtcgtttgcagtcgaagccggccaggcc
gcttatttgcctgtggcgcacgattatcccggcgcaccggcccaacttgaccggcaaacc
gtattggacgctttaaagccattgctggaagacccaaacaaagccaagctgggccaaaac
ctgaaatacgatagccatgtgttggtcaatcacggcatcgcgctgcgcggcatccaacac
gacacgatgctggagtcttacgtgttgaacagtaccgcgaccaaacacaatatggacgat
ctggccaagcgttatctgggcgtagagaccattcatttcgaagacgtagccggcaagggc
gccaagcagatcggcttcgccgaagtagccatcgaacaagccagcgaatacgccgccgag
gacgccgacatcaccctgcgcctgcatcaaaccttgtccgagcaattgcaacaacatcct
cgcttgtgggctttgtacaacgagatcgaagtgccactgatcagcgtgttggcgcggatc
gaggaaaacggcgtgctgatcgacagcgcgatgctggcccagcagagcctggaattggcg
aaccggatgataggcatcgaacagcaggcccacgatctggcaggttccgcgttcaacctc
ggttcacccaagcagattcaggaaatcttgtacgaccgtttgaatctgccggtattgaag
aaaaccccgaaaggtcagccctccaccgacgaatcggtgttacaagaactggcggtggat
tacgccttgcctaagctgattctggattttcgcggcatgagcaaactcaaatccacctac
accgacaaactgccgcagcaggtcaacgaccgcaccggccgggtgcatacctcctatcat
caggccgtagccgccaccgggcgcttgtcgtcgtccgatcctaatctgcaaaacattccg
attcgtagcgaagaaggccgcaagattcgtcaggccttcatcgccccgcccggctataaa
atcgtcgccgccgactattcgcagatcgaactgcgcatcatggcccacctatccggcgat
gccggcctgctggcagcgttttcgcaaggcgtggatgtgcatagcgccaccgcggcggaa
gtgtttgaagtggaactggagcaagtcactcacgatttgcgccgctctgcaaaggccatc
aatttcggtttgatttacggcatgtcggcgttcggtctggcgcagcaattgggcttgccg
cgcaatcaagcccaggcgtatatcgatctatacttcagccgttaccccggcgtgaaacag
tatatggacaccacgcgtgaactggcgaaacagcaaggctatgtcgaaaccattttcggc
cgccgcctgtatttgccggagatcaactcccgtaatgccgcgatgcgccaatacgccgaa
cgcactgctatcaacgcgccgatgcagggcaccgccgccgacatcatcaagcgggcgatg
ctggcttgcgatacctggatcactgccgatagcccggatgtgaagatgattatgcaagta
cacgacgaactggtgttcgaagtggcagaagcgcagctgacggatcacgtcgaaaccatc
cgcggcatcatgtccggcgccgctgaactgcatgtgccattgctggtggaagtgggtagc
ggcgagaattgggacgaagcgcactaa
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