Methylomonas montana: QZJ86_20725
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Entry
QZJ86_20725 CDS
T09581
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mmot
Methylomonas montana
Pathway
mmot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QZJ86_20725 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmot03400
]
QZJ86_20725 (recB)
Enzymes [BR:
mmot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QZJ86_20725 (recB)
DNA repair and recombination proteins [BR:
mmot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QZJ86_20725 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WKJ90402
LinkDB
All DBs
Position
complement(4475150..4478653)
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AA seq
1167 aa
AA seq
DB search
MASKAFDAITSELETGINLIEASAGTGKTYTIAMLVLRFVVEQQLDIKQLLVVTFTKAAS
EELKERIRDRLAEARQVLLKNQPKADPAIHNWLAGLELDSDSIRQRLDLALLDIDQAAIF
TIHGFCQRVLAEHALESGQLFDCKLSGDIADLKLHCADDFWRRQIYSRPAWQVTLLTRAY
PTPDALLASINGVALQQNTYPDDDDVDAGLARLPGLIAAAESSLPAVLITLETAFADGLF
TASFVRDFPALADALRTWLADQSADLPEMDWLSETGLLAGLNGVKFRTSKTKPLPSAEQK
QIYLDSLAIDCGPFETLATALSHLQVTFRNALLSSLRTELDKRLQQNNVLSFDDLITRLA
AALRGDNGPLLISELRQRFRAALIDEFQDTDVNQWRIFSGIFADASQYLYLIGDPKQAIY
KFRGADIFSYFAAQSQAQQHYTLLHNWRSHPQLVAGVNRLFQRAQPFLFDRLDFTPVQAG
RSIADGRIGDAAPLVLWQLDKNSGNQEYWTARQGSSKEVGDLIRSAVISEILQLLSSGKI
TEKGQAERTLQPRDIAILVRSNSAAADYQKALLEAGIPAVLNSKQSVFASPQAFELYCVL
QAVAQPGQIGALKQALTVGWFDLDGQQLYRLGQDEAALDGWLNRFQDYLQCWQRQGLLAM
MQQLLRRERVEVHLSVLPQAERALTNIHHLIERLQQAAIDEHLAINKSLDWLRRAIQQSG
QVSGDEQQLRLESDEDAVKIVTLHSAKGLEYPLVFCPDLWRRSDRLKNERRLVQCHESGE
MIADLGSEKFIEHREQALHEELAEDLRLFYVAVTRAKYRCYLNWADVRTKDKANNSAFAY
LFEFADDDFASQQLKLKALATEAPQRFEYRLLPAETEAGGRYQAASDDRPLACRSRRRSL
HSVWQMSSYTALAALTLEDAPELPADKAEEAADTALIDDGLPRGAHTGNVIHSLLETVDF
KMLAVGADISRQRDQACLRYGLRLEQPQRLNRLLLDTVSTPLAADPDFCLKNLPAAGIVK
EMPFYLAMPDVVDTLQINRMLAASPAYQPLTAKQMSGYLTGFIDLVCEYQGKFYVMDYKT
NALADYSHPSLLQAMREHNYGLQYWLYSVVLDAYLQQRLAGYRYAEHFGGVKYLFVRGMR
GDVSGSGVYTDLPDEEMLRELAGVFFQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaaagccttcgatgcgataaccagcgaactggaaaccggcatcaatctgatc
gaggccagcgccggcaccggcaagacttacaccatcgcgatgctggtgttgcgcttcgtc
gtcgagcagcagctggacatcaaacaattactggtggtgactttcaccaaagccgccagc
gaggaattgaaggaaaggatacgcgaccggctggccgaggcccgccaagtactactaaaa
aaccaacccaaagccgatccggccatccacaattggctggccggtctggaactggatagc
gacagcatccgccaacgcctggatctggcgctgttggacatcgatcaagcggcgatcttc
acgatccatggtttctgtcagcgggtgctggccgagcatgccctggaaagcgggcaattg
ttcgattgcaagttgagcggcgacatcgccgatctgaaactgcattgcgccgacgacttc
tggcgccggcaaatctatagtcggccggcctggcaggttaccttgctgacccgagcctat
ccgacgccggacgcgttgctcgccagtatcaacggcgtggccctgcaacaaaacacttat
ccggacgacgacgatgtcgatgccggcctggcgcgattgccggggctgattgccgccgcc
gagagcagcctgcctgcggtgttgattaccctcgaaacggcttttgccgatggtctgttc
accgccagtttcgtccgggactttccggcgctggccgatgcattacgaacctggctggcc
gatcagagtgccgatctgccggagatggactggctgagcgagaccggtttattggccggc
ttgaacggcgtcaaattcaggaccagcaagaccaagcccttgcccagcgcggaacagaag
cagatttatctcgacagtctggcgatagattgcggcccgttcgaaaccttggccaccgcg
ctaagtcatttacaggtaacgtttcgcaacgccttgctaagcagtttgcgcaccgagctg
gataaacgtctgcaacaaaacaacgtgctgtccttcgacgacctgatcactcgcttggcc
gcggccctgcgcggcgataacggtccgctgttgatcagcgaattgcggcagcgcttccgg
gcagcgttgatcgacgagtttcaggacaccgacgtcaaccaatggcgaattttctccggc
atcttcgccgatgccagccagtatctgtatctgatcggcgatccgaaacaagccatctac
aaatttcgcggcgccgacattttttcctacttcgccgcgcagagccaggcccaacaacat
tacaccttgctgcataactggcgttcgcatccgcaattggtggccggcgtcaatcggttg
ttccagcgcgcccaaccgtttttgttcgaccggctggatttcacgccggtgcaagccggg
cgtagcatcgccgacggccgcatcggcgatgctgcaccgctggtgttgtggcagctggat
aaaaattcgggcaatcaggaatattggaccgcacgccaaggcagctccaaagaagtcggc
gacctgatccgcagtgccgtgatcagcgagattttgcaattgctcagcagtggcaaaatc
accgaaaaagggcaggccgagcggactttacagcccagggatattgcgatactggttaga
agcaatagcgccgccgccgattatcagaaagctttgctggaagcgggcattccggcggtg
ttgaacagcaagcaatcggtattcgcctcgccgcaggcgtttgaactgtattgcgtgttg
caggcggtagcgcaacccggccagatcggcgcattgaaacaggcgctaaccgtaggctgg
tttgatctggacggccagcaattgtaccggctcggccaggacgaagcggcgctggacggc
tggttgaaccggtttcaggattatctgcaatgctggcagcgccagggcctgttggcgatg
atgcagcaactattgcgcagggaacgagtggaagtgcatttgtccgtgctgccgcaagcc
gaacgcgccttgaccaacatccatcatcttatcgagcgcttgcaacaggcggcaatagac
gaacatctggcgatcaataaatcgctggactggctgcggcgggcgattcagcagtccggc
caagtcagtggcgacgaacaacaattgcggctggaaagcgacgaggacgcggtgaaaatc
gtcacgttgcatagcgccaaaggcttggaatatccgctagtgttctgcccggacctgtgg
cggcgcagcgaccgcttgaaaaacgagcgacgtttggtgcaatgccacgagagcggcgaa
atgatcgccgacctgggttccgagaagtttatcgaacaccgcgaacaagccttgcacgaa
gaactggccgaggatttacgcttgttttacgtggcggtcacccgcgccaaataccgctgc
tatctgaactgggccgacgtgcgcaccaaggacaaggccaacaactcggcgtttgcttac
ttgtttgagttcgccgacgatgatttcgctagccaacagctcaaactaaaagccttggcg
accgaagctccgcagagattcgaatatcggctgttaccggcagaaacagaagccggcggc
cgctatcaagccgctagtgacgatagaccgctggcctgccggtcgcgtcgccgcagcctg
catagcgtctggcaaatgagcagctacaccgcgctggcggcattgaccttggaagacgcg
ccggagctgccggccgacaaagccgaggaagccgccgatacggctctcatcgacgatggc
ttaccgcgcggcgcgcataccggcaacgtcatccacagcttgctggagactgtcgatttc
aaaatgctggccgtcggcgccgacatcagtcggcaacgcgatcaagcctgcttacgttat
ggcttgcgcttggagcagccgcaacgattgaatcgattattgctcgatacggtttcgacg
ccgctggctgccgatccggatttttgcctgaaaaacctgcccgccgccggtatcgtcaag
gaaatgccgttttatctggccatgcccgatgtggtggacaccctgcaaattaaccgcatg
ctggccgccagccccgcctaccagccattgaccgccaaacaaatgagcggttatctgacc
ggcttcatcgatctggtctgcgaatatcagggcaaattttatgtgatggactacaaaacc
aacgcgctggccgactatagccatcccagcctgctgcaagcgatgcgcgaacataattac
ggcttgcagtattggctgtacagcgtggtgctggacgcttatctgcaacagcgcttggca
gggtatcgctatgccgagcattttggcggggtgaagtatttgtttgtccggggaatgcgg
ggagatgtttcaggtagcggggtgtatacggatttgccggatgaagaaatgcttcgggaa
ttggcgggagtgttttttcagtag
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