Methanococcus maripaludis S2: MMP0322
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Entry
MMP0322 CDS
T00164
Symbol
rfcB
Name
(GenBank) replication factor C, large subunit
KO
K04800
replication factor C large subunit
Organism
mmp
Methanococcus maripaludis S2
Pathway
mmp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMP0322 (rfcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmp03032
]
MMP0322 (rfcB)
DNA replication proteins [BR:
mmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
MMP0322 (rfcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rad17
RCF1-5-like_lid
RuvB_N
AAA_14
DUF815
AAA_22
AAA_lid_RFC1
nSTAND3
NB-ARC
AAA_assoc_2
DEAD
RFC1
TIP49
Mg_chelatase
AAA_17
AAA_33
ResIII
ATPase_2
NPHP3_N
AAA_30
nSTAND_NTPase5
NACHT
AAA_25
AAA_18
IstB_IS21
AAA_16
AAA_RNF213_4
Zeta_toxin
ABC_tran
RNA_helicase
AAA_24
AAA_5
AAA_28
Sigma54_activ_2
DnaB_C
AAA_7
NTPase_1
TsaE
AAA_19
ATPase
Parvo_NS1
Teflon_middle
T2SSE
AAA_29
DDB_G0281631_C
AAA_11
ADK
Phage_pRha
Cdc6_lid
Sigma54_activat
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CAF29878
UniProt:
Q6M0E9
LinkDB
All DBs
Position
318173..319633
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AA seq
486 aa
AA seq
DB search
MEEWVEKYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAIA
NDYAFDVIELNASDKRNKDVISQVVGTAATSKSLTGRRTLIVLDEVDGLSGNDDRGGVAE
IIKVLKTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPVLRRIALKEGFEID
EKIIKMIASHSGGDLRAAINDLQSLATGGSIEIEDAKELPDRDSEKSIFDAMRIIMKTTH
YDIATSATRDVKEDIGTIEEWISENLPKEYLKYKDLAEGYDYLSKSDVFLGRVYRRQYFG
LWRYASALMTAGTALAKEEKYRGFTRYGPPAIFTKLSRTKGSRQKMKDILKKIALKTHTS
TKRARNTVDYLTVIFESNAEVSAELVEYYELTKDEIEFLTNKTITKKILSVIAGKKPKVK
KETPKKTEKPKEVMPIIPKRPRISEPPKEPLKEVIEETLEKSVEKADTKEEKKKDPKKQA
TLDSFF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtgggttgaaaaatacaggccaaagtcattaaatgatgttgcagggcacaat
aaaactaaacaagcgcttattgaatggattgaatctatcataggtggccaaaatcaaaaa
ccaatactcttggcagggcctccaggatcgggtaaaaccacattagcttacgcgattgca
aacgattatgcatttgatgtaatcgaacttaatgcaagtgacaagcgaaataaggatgta
atttcacaagttgtgggaactgcggcaacttcaaaatctcttactggaagaaggacgtta
atcgttttagacgaggttgacgggctctctggaaatgatgataggggaggggtagctgaa
ataataaaagttttaaaaacagcagaaaaccctgtaattttaactgcaaacgatgtatac
aaacctgctttaatgacgcttagaaattctgtaaatctgataaatgtcggttcagttcac
acaaactcgattccgccggttttaagaagaattgcactaaaagaaggttttgaaattgat
gaaaaaataattaaaatgattgcaagtcattctggcggagatttaagggctgcaataaat
gatttacaatcacttgcaacaggtggctctattgaaatcgaagatgcaaaagaacttccc
gatagggacagtgaaaagagcattttcgatgcaatgagaataataatgaaaacaacccac
tacgacattgcaacaagtgctacaagagatgtaaaagaagatattggaaccattgaagag
tggatttctgaaaatcttccaaaagaatatttaaaatacaaggatcttgcagaagggtat
gattacctttcaaaatcagatgtatttttgggaagggtttaccgaagacagtattttgga
ctttggagatatgcttcagctttgatgactgcagggactgctttagcaaaagaagaaaag
tatcgaggatttaccagatatgggccacccgccatatttacaaaattaagcaggactaag
ggtagcagacagaaaatgaaagatattttgaaaaaaatagctttaaagacccatacttca
acaaaaagagcaagaaacactgtagattacttgactgtaatttttgaatcaaatgcggaa
gtttctgcagaacttgtggaatattatgaacttacaaaggatgaaatagagtttttaact
aacaaaacaattacaaaaaagatactttcagtaattgcaggtaaaaaaccaaaagttaaa
aaagaaactccaaagaaaacggaaaaaccaaaagaagtaatgccaattattccaaaacgc
ccaagaatttcggaacctccaaaagaacctttaaaagaagtaatcgaagaaaccctcgaa
aaatctgttgaaaaagcagatacaaaagaagaaaagaaaaaagatccaaagaaacaggcg
actttggacagtttcttttaa
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