Methanococcus maripaludis S2: MMP0427
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Entry
MMP0427 CDS
T00164
Symbol
rfcA
Name
(GenBank) Replication factor C, small subunit
KO
K04801
replication factor C small subunit
Organism
mmp
Methanococcus maripaludis S2
Pathway
mmp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMP0427 (rfcA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmp03032
]
MMP0427 (rfcA)
DNA replication proteins [BR:
mmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
MMP0427 (rfcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
RuvB_N
AAA_assoc_2
AAA_14
AAA_16
nSTAND3
AAA_3
Mg_chelatase
AAA_18
AAA_24
AAA_22
ResIII
AAA_2
AAA_5
TIP49
RNA_helicase
KTI12
AAA_28
CbiA
Cdc6_lid
DNAX_ATPase_lid
FtsK_SpoIIIE
AAA_25
IstB_IS21
TPR_7
NPHP3_N
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAF29983
UniProt:
Q6M044
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All DBs
Position
complement(428224..429171)
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AA seq
315 aa
AA seq
DB search
MQKPWVEKYRPETLSEVVGHHEIIKRLTNYVEKKSMPHLLFSGSPGVGKTTAALALAKDL
YGDTWRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFKVIFLDESDALTSDAQNAL
RRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVENLKDISEKENLNLE
KGGIDAIIYVSEGDMRKAINVLQTAAAVSDEITEEIVYKVASKARPDEIKKMTQLALNGK
FVEAREQLYNLMIDWGMSGEDILIQVFREVPNLDISEKEKVHLVEAIGECDFRIVEGSNE
RIQLSALLAKMGILE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaccatgggttgaaaaatacaggccagaaacactttccgaagttgttgggcat
catgaaattatcaaaagacttacaaactacgttgaaaaaaagtcaatgccccacttgctc
tttagtggttctccaggagttggaaaaacaactgcagcactcgctcttgcaaaagattta
tacggcgacacttggagggaaaatttcctcgaattaaacagttctgatgaaagaggaatt
gatgtaatcagaaccaaagtaaaagactttgcaagaacaaaacctatcggggatgcaccg
tttaaagtcatatttttagatgaaagtgatgctttaacttcagatgctcaaaacgcgctt
agaagaaccatggaaaaatattccgatatctgcaggtttattttaagctgcaactatcca
agcaaaattattccgccaattcagtcaagatgtgcaatctttagattttcaccgttaaaa
actgaagatttagttgaaaatttaaaagatatttctgaaaaagaaaatttaaatcttgaa
aagggaggaatcgatgcaataatatatgtttcagaaggagacatgagaaaagcaattaac
gttttacaaaccgcagctgcagtttctgatgaaataaccgaagaaatagtttataaagtt
gcttcaaaagcaagacctgatgaaattaaaaaaatgacgcaacttgcattgaatggaaaa
ttcgttgaagcaagagaacagctctacaacttaatgatcgactggggaatgagtggagaa
gacatattaattcaggtatttagggaagttccaaatttagatatttctgaaaaagaaaaa
gtacatttagtcgaagcaattggagaatgcgactttagaatcgttgaaggctcaaacgaa
agaatacagttaagtgcactccttgcaaaaatgggaattttagaataa
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