Methanococcus maripaludis S2: MMP0457
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Entry
MMP0457 CDS
T00164
Name
(GenBank) Probable ATP dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmp
Methanococcus maripaludis S2
Pathway
mmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMP0457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmp03019
]
MMP0457
03009 Ribosome biogenesis [BR:
mmp03009
]
MMP0457
Enzymes [BR:
mmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MMP0457
Messenger RNA biogenesis [BR:
mmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMP0457
Ribosome biogenesis [BR:
mmp03009
]
Prokaryotic type
rRNA helicases
MMP0457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
AAA_30
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CAF30013
UniProt:
Q6M016
LinkDB
All DBs
Position
450214..451830
Genome browser
AA seq
538 aa
AA seq
DB search
MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP
ILETIDEHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRR
GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRML
LFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEK
EFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDV
AARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKIA
KTEIKREEVPDVKDIISAKKIKIISGIKEVLESGKYADCEKMASDLLEDADPQEVLSAVL
KYALKDELSESNYKKIGRGSQRSERSGRNDSRGRRSFAPGENVRLFVALGKLDKMNPKKL
VDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEIILDSFKNERRGRRSIIEVASGN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttaaaaatttaggtctatctgacgagatattagaagcattagaaaagaaa
ggcttcacaaacccaacccctattcaggaacaagcaattcctattttaattgaaggaaaa
agagatattgtcggccaagctcaaacaggtacgggaaaaaccgcagcatttggtattcct
attttagaaacaattgatgaacactcaaggaacacgcaagcacttattttagcacctaca
agagaactcgcaatacaagttgcagaagaaatcgattcaatcaaaggttcaaaaagattg
aatgttttcccagtatatggtggtcaatcaattgacagacagataagagaattaagaagg
ggagttcagattgttgttggaactcctggaaggatcctcgaccacatctcaagaagaaca
ataaaacttgaaaacgtttcatatgtagttttagatgaagctgatgaaatgttaaacatg
ggattcattgacgatgttgaagaaatcttaaaatcagtaagcactgacaaaagaatgctt
ttattctcagcaacacttcctgacagcatcatgaaacttgctaaaaattacatgagagaa
tacgacatcatcaaagttaaaagacagcagcttacaactactttaaccgaccaatcattc
tatgaaattcattcaagagataaatttgaattactttcaagaatcattgacacggaaaaa
gaattttacggtttaatcttctgtaaaacaaaagcagacgttgacgaagttgcaaacaga
ttaaatgagaaagggtatgctgcagaaggtcttcacggggacatgacccaagctcaaaga
gaaaaaacactcgacaaatttaaaggaaagaaaatcaacgttctcgtagcaactgatgtt
gcagcaagaggaattgatatcaacgatttaacacacgttgtaaactttgatattccacaa
aatcctgaatcatacgtccacagaattggaagaacaggccgagctggaaaacaaggttat
gcaattacatttgttgaaccttcagaatttaggaagtttaaatacatccaaaaaattgca
aaaactgaaattaaaagagaagaagttcctgatgttaaagatataatcagcgctaaaaaa
ataaaaatcatttccggaataaaagaagttttagaatctggaaaatacgctgattgcgaa
aaaatggcttctgatttattagaagatgcagatcctcaagaagttctttcagcagtttta
aaatatgctttaaaagatgaattaagtgaatcaaactacaaaaaaattggaagaggttca
caaagatctgaaagatctggaagaaatgacagcagaggaagaagatctttcgcacctggt
gaaaacgtaagactctttgtagctcttggtaaacttgataaaatgaaccctaaaaaatta
gtggatcacatttcaagaaaatccgatgttaaaggaagagacatcgacgatgtaaaagta
tttgagaaattttcctttgtaacggtatcttcaagcgatgcagaaataattcttgattca
ttcaagaatgaaagaagaggaagaagatcaataatcgaagttgcaagcggcaactaa
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