Methanococcus maripaludis S2: MMP0956
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Entry
MMP0956 CDS
T00164
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmp
Methanococcus maripaludis S2
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmp03032
]
MMP0956 (topA)
03400 DNA repair and recombination proteins [BR:
mmp03400
]
MMP0956 (topA)
Enzymes [BR:
mmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MMP0956 (topA)
DNA replication proteins [BR:
mmp03032
]
Prokaryotic type
DNA Topoisomerases
MMP0956 (topA)
DNA repair and recombination proteins [BR:
mmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMP0956 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
ADK_lid
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
CAF30512
UniProt:
Q6LYN4
LinkDB
All DBs
Position
943765..946236
Genome browser
AA seq
823 aa
AA seq
DB search
MTGLIICEKPNVAKKIAEALGKPKKKSHNSVPYYELERNGESIVVASAVGHLYTLQEKTK
TKFGDYPVYDINWVPASTLDEKKYIQKYIDALKKVSKDANKFYVATDWDIEGELIGYHAL
NFSCGQKNAHRLRFSSLTKKEILKAYENPNEIDFGLVDAGDSRHKIDWYFGINVSRALMQ
AVSSVKRWKTLSTGRVQGPALAFLVDKELEIRNFVPTPYWVLEALLDNDLIAVHELEKFW
DEEQANKAYEKVKGQKQATVSDVKKSMKTIPPNPPFDLGALQREAHNMFRFSPKKTQEVA
QKLYEKGYCSYPRTSSQKLPDDKAYMDEVLKNLSKNKNYKPYIETILNENRKPISGKNDD
PAHPAVHAVDVPKEKLPDDELKLYELIARRTIALYWDNAKREYSKINLDINGETFKLSGS
RTVEEGWHEIYYYTKFDEVELPELKKNDVINVNNINFEAKETKPPKRYTMASIIKELEKR
KLGTKATRADILEKLTKRGYVIEDGSLTVTDLGIGVTETLRKYCPEIVEETLTRDLEDKL
ELIQDKKIKKEEVIQETKDKLTKILGEFRLKEKEIGTELVDKLDSTNRSLQIIGKCKCGG
DMIIIRTKGKKRFVGCSNYPDCEVTFPLPQKGRIKVLNEVCEKCQNPVIGLDRIKICVNP
DCSTRISEEDKKEIEKAEKEEKICPKCGNKLLIKKGPYGVFRGCENYPKCKYTEKLNGES
NEKEIVGKCPKCGSDLYKRKGRFGEFIGCSNYPKCRHTEKIDKKKEDTPGETKAETKKEA
KPKTTKKAAPKKTATKTTKTTAKKTATKKTTTKKATAKKTAEK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgactggactaatcatctgtgagaaaccaaacgttgctaaaaaaattgcagaagccctt
ggaaagccaaagaaaaaatcccataattcagtgccatattatgaattagaacgaaatggg
gaaagtatagtggtagcttctgcggtaggtcacttatacacgctccaagaaaaaaccaaa
actaaatttggagattaccctgtttacgatatcaattgggttcccgcatcaactcttgat
gaaaaaaaatacattcaaaaatatattgatgcactgaaaaaagtttcaaaagacgcaaac
aaattctacgttgcaacggattgggatattgaaggggaattgattggttaccatgcactg
aatttttcatgcggtcagaaaaacgctcacagattaagattttcaagtttaactaaaaaa
gaaatcctgaaagcttatgaaaatccaaatgaaatagattttggacttgttgacgcagga
gacagcaggcacaaaatcgattggtattttggtataaatgtttcaagagcactcatgcag
gcagtaagttcagttaaacgatggaaaaccctcagtacaggtagggttcagggcccagca
cttgcttttttagtagataaagaattagaaattagaaattttgttccaaccccatattgg
gtgcttgaagctcttttagataatgacttaattgcagttcacgagcttgaaaaattctgg
gatgaagaacaggcaaataaagcttatgaaaaggtaaagggtcaaaaacaggcaacagtt
tcagacgttaaaaaaagcatgaaaaccatccctccaaatccgcctttcgatttaggtgca
ctgcaaagggaagctcacaacatgtttaggttttcccctaaaaaaacgcaagaagttgca
caaaaactttatgaaaaaggatactgttcatacccaagaacaagttcacaaaaacttcca
gacgacaaggcatacatggacgaagtcttgaaaaacctttcaaaaaataaaaattataag
ccatacattgaaacaattttaaatgaaaatagaaaaccgatttcaggtaaaaatgacgac
cctgcacaccctgcggtacacgcagtagatgttccaaaggaaaaactgcccgatgatgaa
ttaaagttatacgaacttattgcaagaagaacaattgcactttactgggataacgctaaa
agggaatattcaaaaatcaatctcgatattaacggcgaaacatttaaattaagcggttca
agaaccgttgaagaaggatggcatgaaatatattactatactaaattcgatgaagtagaa
ctcccagaattaaagaaaaatgacgtaataaatgtaaataacattaatttcgaagcaaaa
gagacgaagcctccaaaaagatacacgatggcttcgattatcaaggaacttgaaaaaaga
aaactcggaacaaaagctacaagagcagatatcctcgaaaaactaaccaaacgaggttat
gtaattgaagatggttctttaacggttacagatcttggaattggagttaccgaaacttta
agaaaatactgtccagaaattgttgaagaaacccttacaagagaccttgaagataaatta
gagctcattcaggacaaaaaaatcaaaaaagaagaagttattcaggaaactaaagacaaa
cttacaaaaatccttggagagttccgtttaaaagaaaaagaaatcggaactgaacttgta
gataaactcgattcaaccaataggtccttacaaataattggaaaatgtaaatgtggcgga
gacatgattatcatccgtacaaagggcaaaaaaagatttgttggatgcagtaactatcct
gactgtgaagttacattcccactcccgcaaaagggaagaatcaaggtattaaacgaagtc
tgtgaaaaatgccaaaatccagtaatcgggcttgatagaataaaaatttgtgtaaatccc
gactgcagtacgagaatttcagaagaagataaaaaagaaattgaaaaagctgaaaaggaa
gaaaaaatttgtccaaaatgcggcaataaacttttgattaaaaaaggaccttatggagtt
ttcagaggctgtgaaaactacccaaaatgtaaatatactgaaaaattaaacggggaatcc
aatgaaaaagaaatcgttggaaaatgcccaaaatgcggaagcgacctttataaaagaaaa
ggacgatttggagagtttatcggatgcagtaactacccaaaatgtaggcatactgaaaag
atagacaagaaaaaagaagatacgccgggagaaactaaggcagaaacaaagaaagaagca
aaaccaaaaactactaaaaaagcagctccaaaaaagaccgcaactaaaactactaaaact
actgccaaaaagacggctacgaaaaaaaccacaactaaaaaagcaactgcaaagaaaacc
gcagaaaaataa
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