KEGG   Methanococcus maripaludis S2: MMP1322
Entry
MMP1322           CDS       T00164                                 
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase, subunit D
  KO
K03047  DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
Organism
mmp  Methanococcus maripaludis S2
Pathway
mmp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mmp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MMP1322 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmp03021]
    MMP1322 (rpoD)
Enzymes [BR:mmp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MMP1322 (rpoD)
Transcription machinery [BR:mmp03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     MMP1322 (rpoD)
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac Hce2
Other DBs
NCBI-ProteinID: CAF30878
UniProt: Q6LXM8
LinkDB
Position
1307356..1307898
AA seq 180 aa
MKMELKAPLSFSSALRRIMISEVPTYAIENVYFYENTSSMYDEVLAHRLGLIPIKGVPVS
GDEVIVLTISKEGPCTVYSSDLKSESGEPAFENIPIVKLAEDQKLELETEALVGTGKIHA
KWQPCNASYKQISNDEVEFKIESFGNMDAEDIIRSSLEILKNKAEKFLLELEGQELSDEN
NT seq 543 nt   +upstreamnt  +downstreamnt
atgaaaatggaattaaaagcccctttatctttttccagtgcattgagaagaataatgatt
tcagaagttcctacatatgctattgaaaatgtatacttttatgaaaacacatcttcaatg
tacgatgaagttctagctcacagacttggattaattccaataaaaggagttccggtaagt
ggtgatgaagttatagtacttacaatatccaaagaaggaccttgtacagtatattcatca
gatttaaaatcagaatccggtgagcctgcttttgaaaatattcctatagtaaaattagca
gaagaccagaaacttgagttagaaaccgaagctcttgttggcacaggaaaaattcatgca
aaatggcaaccctgcaatgcaagttacaaacaaatatcaaatgacgaagtggaatttaaa
attgagtcattcggaaacatggatgctgaagacattataagatcttcacttgaaatttta
aaaaataaagctgaaaaattcttattagaattagaaggccaagaattaagtgacgaaaat
taa

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