Methanococcus maripaludis S2: MMP1341
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Entry
MMP1341 CDS
T00164
Symbol
rad50
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmp
Methanococcus maripaludis S2
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmp03400
]
MMP1341 (rad50)
DNA repair and recombination proteins [BR:
mmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMP1341 (rad50)
Archaeal homologous recombinant proteins
MMP1341 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
Rad50_zn_hook
AAA_21
DUF1664
AAA_27
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
CAF30897
UniProt:
P62134
LinkDB
All DBs
Position
1321087..1324068
Genome browser
AA seq
993 aa
AA seq
DB search
MIIKNIKMENFRSHRNTSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL
MQQGAASFSVELEFEMMGNTYLVKRKRFQHKTDDKLYVNGKLNAESASEINKKIEEILEI
DNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEETLLK
LEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENLEKLKLEKNSEILQMEEKFAEN
NQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNISENEENYKKYLELELKIKELNN
KLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKNPDELKENLKENDEKILILDKI
KEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKFD
LEKKLQNETDEKTKLISELTDFEKIEEKINLENELKEKYEDLSEKIDKLNEIVLKKESKI
SEYKNSKAELEKTKDSCHVCQSKITEEKKQELLEKYNSEIQNEQLSTESLKKQLEIILNK
KEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEIS
LIENKLKNLENDYKNCNYSSQFLTKNDESEFLTKKLELSKIIGDYDSSKIENEKKSLENL
KDELKNTIYNLEREINLKKELKNIQNDISSKIGIVECYVKWETEKSDFENKLSECKENYE
KYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTVNYNPE
LHENAKRLYENILNEFNDILRTLERISSELKLKNENISYLNEKIQNLSNKKEEKKKIEEF
KEYLDKIKREIFSKDGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGL
PVETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTIN
QMAIITHHQELEQIADNIVKVRKIGENSKVSLE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaaaatatcaaaatggaaaacttcagaagccacagaaacacatcaataaat
tttagcaaaggaataacttcaataatcgggcaaaatggaagtggaaagtcgtcaattttt
caagcaatgaattttgcactttttgctccgcgtggaaacaattttaggattgaaaattta
atgcaacagggcgctgcatctttttctgtagaattagaatttgaaatgatgggaaataca
taccttgtaaaaagaaaacggtttcaacataaaacagatgataaattatatgttaatgga
aaattaaatgccgaatctgcatctgaaattaataaaaaaattgaagaaattttagaaatt
gataacagcgtattttcaaatgcaatatacataaaacagggcgaaattgcaaatttaatc
cagatgactccaagagatagaaaagaggttattggaaagcttcttggaattgaaaagtac
gaaaaagcctctgaaaaaatgaatattgtaaaaaaaagctacgaagaaacgcttttaaaa
cttgaaggagaattaacccaagaacctgaaattttagaaaatcttgaaaaattaaaaaat
gaagtttctgaatctgaaattttaaaagaagaaattttaaaaaaatatgaaaatttagaa
aaactaaaacttgaaaaaaattcagaaatactccaaatggaagaaaaatttgctgaaaat
aaccagttaaaagaaaatttaaaggatattatctcagaaattaaaaatataaatttagaa
attcaaaatttcaaaaattcactaaatttagttgctgaagaatcaaaaaacatatctgaa
aatgaagaaaattacaaaaaatatttagaacttgaattaaaaattaaagaattaaataat
aagttaataggccataaatcaaactacgaatcatataataaactaaaaacgattgaagaa
tcattattaaaagaattaggtgtattaaaagaatctttaaaagataataaaaaaaatcct
gatgaattgaaagaaaatttaaaagaaaatgatgaaaaaattctaattttagataaaata
aaagaaaaaattaaggaattagaatttattgaaaaacagatttatgaaataaaaatccac
aaaaaaacagtggaaactctttttgatagtgttaaaatttacgatgactcgattaaaact
tttgaagaactaaaaactaaaaaaaatagttatgaaaatcttttaaaagaaaaatttgac
cttgaaaaaaaacttcaaaacgaaactgacgaaaaaacaaaattaatttctgaattaact
gattttgaaaaaatagaagaaaaaataaatcttgaaaatgaattaaaagaaaaatatgaa
gatttatctgaaaaaatagataaattaaatgaaatcgttttgaaaaaagaaagtaaaatc
tcagaatataaaaattctaaggcagaacttgaaaaaaccaaagattcgtgtcacgtttgt
cagtcgaaaataactgaagaaaaaaagcaggaattgcttgaaaaatataattctgaaatt
caaaatgaacaattatcaactgaaagtcttaaaaaacagcttgaaatcatattaaacaaa
aaagagaagatgaaagttaaattaaatgaaattgattcattcaaattaaaatacggggaa
ttaaaagaaaaaaagaattattctttaaaagttgaagaatcaataatcgaaactactgaa
aaattaaacgaattaactggaaaaattaacgaatattcttcattgaatgacgaaataagt
ttaattgaaaataaattaaaaaatttagaaaatgattataaaaattgcaattattcctcc
caatttttaactaaaaatgacgaatctgaatttttaactaaaaaattggaactttcaaaa
attattggagattacgattcttcaaaaattgaaaatgaaaaaaaatcccttgaaaattta
aaagatgaattaaaaaatactatttacaatttagaaagagaaattaacttaaaaaaggaa
ttaaaaaatattcaaaacgatatttcttcaaaaatcggtattgttgaatgttacgttaaa
tgggaaactgaaaaatcagactttgaaaacaaattatcagaatgtaaagaaaattatgaa
aaatatatggaaagtctggcagttcttaaaaactattcaaaaacgtattctgttgaaata
aataatttaaacgagtttttaaaccaaaaaattgctgaaaaacagcagttttgtgaaaaa
ctccttgaaacacgaaccgaaattgaaaaaaatattcagactgtaaactacaatccagaa
ttgcatgaaaacgctaaaagactttatgaaaatatattaaatgaatttaacgacatttta
agaactttagaaagaataagctccgaattaaaacttaaaaatgagaatataagttattta
aatgaaaaaattcaaaatctgtcgaataaaaaagaagaaaagaaaaaaattgaagaattt
aaagaatatctcgataaaataaaaagagaaatcttttcaaaagatggtttccaaaaatat
ttaagagaaaagtatattccattaattcaaaggcatacaaaccagatttttcaggaattt
gaacttccatattcccatattcaactaaaagatgattacagcttgatagttgacggcctt
cctgttgaaacattaagtggcggagagcagattgcagtatctcttgcattaagacttgga
atttctaaagcagtttgtaataatatcgaatgcattattttggatgaaccaacagcgtat
cttgatgaagatcgccgtaaaaaccttttaaatattttcaaaaacataaaaacgataaac
cagatggcaataattacgcaccatcaagaactcgaacagattgcagataacattgtaaaa
gttagaaaaatcggcgaaaattcaaaagtatctttagaatag
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