Methanococcus maripaludis S2: MMP1362
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Entry
MMP1362 CDS
T00164
Symbol
rpoB1
Name
(GenBank) Glycoside hydrolase, family 1:DNA-directed RNA polymerase, beta subunit:ATP/GTP-binding site motif A (P-loop)
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mmp
Methanococcus maripaludis S2
Pathway
mmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMP1362 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmp03021
]
MMP1362 (rpoB1)
Enzymes [BR:
mmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMP1362 (rpoB1)
Transcription machinery [BR:
mmp03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MMP1362 (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_Ribbon_TF
RNA_pol_Rpb2_45
Zf_2nd_IFT121
Auto_anti-p27
Zn_Tnp_IS91
DZR
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CAF30918
UniProt:
Q6LXI9
LinkDB
All DBs
Position
1340896..1342731
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AA seq
611 aa
AA seq
DB search
MEKQTNVYVNGKLIDTTQDPETLVKNLRENRRSGKLSPSTSISFNEESNDVHISTDGGRA
VRPLIVVENGASKVTEEILEKMESKELTFLDLVNSGIIEYLDAEEEENARIAMYEDEITE
ENTHVEIDPLVILGIGAGVAPYPEHNSAPRITMAAAMSKQSLGIPMANIKWRMDTRGHLL
HYPQVPLVRTKHQEILGFDKRPAGQNFVVAVMSYEGYNMEDAFIINKASLERGLGRSSFF
RSYESFEKRYPGGQLDKFEVPEKGVRGYRAEEAYRNLGDDGLIDLESSVKSGDVILGKTS
PPRFLEEQEITLQTKSQRRDTSVTIRHGEEGIVDLVILSETKEGNRLGKVRVRDLRIPEF
GDKFASRHGQKGVIGLIVPQEDLPYTEDGVIPDLIINPHAIPSRMTIGQVLEMIGGKVGS
LECRRIDGTIFSGESEWKLREGLEKYGFEHHAKEAMYDGKSGRKLECDIFVGVAYYQKLH
HLVAGKIHARSRGPIQVLTRQPTEGRAREGGLRFGEMERDVLVAHGAAMLLKERLLDESD
PHEDYVCAKCGEIAIFDYKRGMKFCPVCGESEDIQDNRKIPPVKIAYAFKLLLDELKSMG
IDPKLELKDRA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagcagacaaatgtatatgttaacgggaaattgatcgataccacacaagaccct
gaaacacttgttaaaaacttaagggaaaacagaagaagtggaaaattatcgccaagcacg
tcaatttcgttcaatgaagaaagtaacgatgtccacatttcaaccgatggtggaagggct
gtaagaccattgattgttgttgaaaacggtgcttcaaaagtaacagaagaaatactcgaa
aaaatggaatctaaagaattaacttttttagatttagtaaattcaggaattattgaatat
ttagatgctgaagaagaagaaaacgcaagaattgcaatgtatgaagatgaaataaccgag
gaaaacacgcacgttgaaattgaccctctcgttattttaggtatcggtgcaggtgttgcc
ccatatccagaacacaattcagctccaaggattacaatggctgctgcaatgagtaaacag
tcacttggaattcctatggcaaacataaaatggagaatggatacaagaggacacttatta
cactacccgcaagttccacttgtaagaacaaaacaccaggaaatcttaggatttgataaa
agacctgctggacagaacttcgttgttgcagttatgagttacgaaggctacaacatggag
gatgcgttcattatcaacaaagcatctcttgaaagaggtcttggtagaagttcattcttt
agaagctacgaaagctttgaaaaaagataccctggaggacagctcgataaattcgaagtt
cctgaaaaaggagttagaggttacagagctgaagaagcctacagaaacttaggtgacgat
ggtttaatcgaccttgaatcctcagtaaaatcgggagatgtaattttaggaaaaacgtca
cctccaagatttttagaagaacaagaaatcacccttcaaacaaaatcacagagaagagac
acttcagttacgattcgacacggtgaagaaggaatcgttgacctcgtaattttaagtgaa
acaaaagaaggaaacagacttggaaaagttagagttagagatttaagaattcctgagttt
ggtgacaaatttgcatcaagacacggtcagaaaggggttattggactcattgttccacaa
gaagacttaccctatactgaagatggagtaattcctgatttaattatcaacccgcacgcg
atcccttcaaggatgactatcggacaggttcttgaaatgattggtggtaaagttggttca
ttggaatgcagaagaatcgacggaacaattttcagcggcgaaagcgaatggaaattaaga
gaaggccttgaaaaatacggctttgaacaccatgcaaaagaagcaatgtatgatggaaaa
tccggtagaaaattagagtgcgatattttcgttggagttgcatactaccagaaattacac
cacttagttgctggaaaaatccacgcaagaagcagaggaccaatccaagttcttacaaga
cagcctacagaaggtagagcaagagaaggaggtcttaggtttggggaaatggaaagagat
gtgttagttgcccacggtgctgcaatgctccttaaggaaagacttctcgatgaatcagac
cctcacgaagactacgtctgtgctaaatgtggtgaaattgcaatcttcgattacaagaga
ggcatgaaattctgtccagtttgtggtgaatcagaagacattcaagataacagaaagatt
ccacctgtaaaaattgcttatgcattcaaattattgttggatgagcttaaaagtatggga
atcgatccaaaattagaattaaaagacagagcataa
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