Methanococcus maripaludis S2: MMP1686
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Entry
MMP1686 CDS
T00164
Symbol
cbf5
Name
(GenBank) pseudouridine syntase related protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmp
Methanococcus maripaludis S2
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmp03016
]
MMP1686 (cbf5)
Enzymes [BR:
mmp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MMP1686 (cbf5)
Transfer RNA biogenesis [BR:
mmp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMP1686 (cbf5)
Prokaryotic type
MMP1686 (cbf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DUF2805
Motif
Other DBs
NCBI-ProteinID:
CAF31242
UniProt:
Q6LWM3
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All DBs
Position
1627999..1629000
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AA seq
333 aa
AA seq
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MELIVKEESKTDYNYGSDPYNRDIKTLLNTGLVVIDKPSGPTSHEVAAWVRNMLNLVKAG
HGGTLDPKVTGALPVALGNTTKCVPIWHIPPKEYVCLMHLHDDAELVDIENIFKEFTGRI
HQRPPLKAAVKRSLRIRKIYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEALGTSAH
MQELRRTISGPFYENEAVYLQDLLDAYIFWKEDGNEEELRKIVKPLEYGLQHLKKIIIKD
SAVDAVCHGATLYSSGISKIEKGLGTDEVVLIETLKGEAVAVGKPLMNTKDMLKTEEGEV
VEITRVIMEPGIYPRIWKKRNKNDKSKPELKKK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttggaattaattgtaaaagaagaatcaaaaacggattataattacggatctgacccatac
aatagagatataaaaacactcttaaatactgggctcgttgtaatcgataagccatctggc
cctacttcgcacgaagttgccgcatgggttagaaacatgctaaatttagttaaagcaggt
cacggcggaacccttgacccaaaagttactggagcactccctgtagctttaggaaacacg
acaaaatgcgttccaatctggcacatcccaccaaaagaatatgtgtgtttgatgcattta
cacgatgatgctgagcttgttgatattgaaaatatttttaaagaatttactggaagaatt
caccaaagacctcctttaaaagcagcggttaaaagaagccttagaattcgaaaaatatat
gaaattgagattttagaaatcgatgggcgagatatattatttagaacaaaatgccaatct
ggaacgtatctaagaaaactcgtagatgatatgggtgaagcgcttggaacttctgcgcac
atgcaggaacttagacgaaccattagcggaccattttacgaaaatgaagctgtttattta
caggatttacttgatgcatatatattctggaaggaagacggaaacgaagaagaattaaga
aaaatagtaaaaccccttgaatacgggctacaacatcttaaaaaaataattataaaggat
agcgcagttgatgcagtgtgccatggcgctacactttattcttcgggaatctcaaaaatt
gaaaaggggcttggaaccgatgaagttgttttgattgaaacactgaaaggagaggctgtt
gcagttggaaaacctctcatgaatacaaaagatatgttaaaaactgaagaaggcgaagtt
gtagaaataacgcgtgttataatggagcccggaatttatccaagaatctggaaaaaaaga
aataaaaatgataaaagtaaaccggaattaaagaagaaataa
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