KEGG   Methanococcus maripaludis C5: MmarC5_0025
Entry
MmarC5_0025       CDS       T00491                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mmq  Methanococcus maripaludis C5
Pathway
mmq02024  Quorum sensing
mmq03060  Protein export
mmq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mmq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MmarC5_0025
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MmarC5_0025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MmarC5_0025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mmq02044]
    MmarC5_0025
Enzymes [BR:mmq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MmarC5_0025
Secretion system [BR:mmq02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MmarC5_0025
  Eukaryotic Sec-SRP protein
   MmarC5_0025
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 cobW nSTAND3 CbiA AAA_16 NPHP3_N Zeta_toxin AAA_24 6PF2K nSTAND_NTPase7 AAA_17 AAA_30 LpxK ParA AAA_33 APS_kinase AAA_25 MobB SLFN-g3_helicase SWI2_SNF2 AAA_18 NACHT DUF6909 AAA KTI12 HTH_1 ResIII AAA_14 RNA_helicase Thymidylate_kin AAA_19 UPF0004 MeaB AAA_28 TsaE MMR_HSR1
Other DBs
NCBI-ProteinID: ABO34342
UniProt: A4FVX4
LinkDB
Position
19480..20832
AA seq 450 aa
MLDKLGQNLSDALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI
EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL
ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK
KVDVIIIDTAGRHKEEESLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSE
IGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGDLD
SLLEKTEDIMDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGNLPK
EAAQLTEDKLKRYKIMMDSMTLEEKENPELIKTSRLQRIAKGAGVKQDEIKDLLKYYSTT
KNAFGNLKRGKMPKMGGQMGQIMRQLMYKD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcttgataaattaggccagaacctctctgatgcactaaacaaaattaagaacgctact
tttgtcgataaaaaactcgtaaaagaagtaattaaagatatccagaaagctttaatccaa
tctgacgttaatgtaaagctcgtatttaatatgagcaaggaaattgagagaaaagctatt
gaagaagcgcctccaaaaggactctcgaaaaaagagcacattgtaaagattgtttacgat
gaacttgtaaaattacttggagaaaccactcaaaaattagaacttgacccttcaaaaaaa
tctgtaattttacttataggtattcagggaagcggtaagacaacgagtgccgcaaaactt
gcaagatatatccagaaaaaaggtttaagacctggattaatcgcagcggatgtttacaga
cctgcagcataccagcaattgaagcagctatctgaaaaaataaatgttccactatttggt
gacgaaacaagaacaaaaactcccgtagacatcactaaagaaggaatggaaaaactgaaa
aaagtagatgttataatcatcgatacagcaggtaggcacaaggaagaagaaagtctctta
gctgaaatgaaagaaatgaaggatttaaccaatccaaatgaaataatccttgtaattgat
ggaacattaggtcagcaggctaaaaatcaagcaaaagcattcaaagaatcagtttcagaa
atcggaagcattcttgttacaaaattagatggttcagcaaaaggtggtggtgcgttaagt
gccgttgcagaaatcaatgctccaattaaatttatcggaactggtgaaggagtcgacaat
ttagaacagtttgatcctaaaaaattcatatccaggattcttggacttggggacttagac
tctcttttggagaaaactgaagacataatggacgaatcaacggaagaaagtattgattca
attttaaaaggtaaatttacattaattgagctttatgcacagcttgaaaccatatcaaaa
atgggtccaatgaaacagattttaagtatgattccgggaatgggcggaaaccttccaaaa
gaagctgcacagttaactgaagacaagctgaaaagatacaaaatcatgatggactctatg
acactggaagaaaaagaaaatcctgaactcataaaaacttcaagactccagagaattgca
aaaggagcaggggtaaaacaggatgaaataaaggatcttttgaagtactattcaactaca
aaaaatgcttttggaaatttgaagcgtggaaaaatgccaaaaatgggtggacagatgggc
cagatcatgaggcagttaatgtataaagattaa

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