Methanococcus maripaludis C5: MmarC5_0237
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Entry
MmarC5_0237 CDS
T00491
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmq
Methanococcus maripaludis C5
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmq03400
]
MmarC5_0237
DNA repair and recombination proteins [BR:
mmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MmarC5_0237
Archaeal homologous recombinant proteins
MmarC5_0237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_29
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_27
DEAD
ABC_tran
Occludin_ELL
MukB
Motif
Other DBs
NCBI-ProteinID:
ABO34553
UniProt:
A4FWH8
LinkDB
All DBs
Position
complement(204156..207137)
Genome browser
AA seq
993 aa
AA seq
DB search
MIIKNIKMENFRSHRNTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL
MQQGSASFSVELEFEMMGNIYLVKRKRFQNKTDDKLYVNGKLNAESASEINKKIEEILEI
DNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEEMLFK
LEGELVQEPEILENLEKLKNEVSESEILKEEILKKYENLEKLKLEKNSELISMEEKFAEN
NLLKENLKDIISEIKNINLEIQNLENSLSSVVEESENLFKNEEIYKKYLELELTIKELNT
KLISHKSDYESYNKLKTIVESLINELNILKESLKDNKKNPDELKENLNEIDKKIQKLDGV
KEKITELNFIEKQISGINDHKKTVETHFDSSKLYEDLIKTFDGLKTKKNSYENLLKEKND
LEKKLQSAIEEKIKLISELTVFEKIEEKINLENELKEKYEGLSEKIDKLNEIITKKESKI
LETKNYKLELEKTKDSCHVCQSKITEEKKQELLKKYTSLIQNEGLSIESIKKQLEVILNK
KEQLKLKLNEIDSFKSKYGELKEKKNYLLKVEESIIENTQKLNELTEQLNEYSSLNDEIK
LIENKLNDLEEIYKKYTYSVQFLTKNDESEILNKKSEILKIIGDYDYLKIKNEKESLENL
KDELKIIISNLERENKLKSELKDIQDNMSSKIGIVECYIKWETEKSAFETKISEYKENYE
KYMESLAVLKNHSKIYSVEINELNEFLNQKLAEKQNISKKLLENRINTEKNIQIVNYSPE
VHENAKKAYESIINKFNDISITLERINFELKLKNENIVYLNEKIQNLANKKEERRKIEEF
KEYLDKIKREIFSKDGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGL
PVETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTIN
QMAIITHHQELEQIADNIVKVRKIGENSKVSLE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaaaatatcaaaatggaaaacttcagaagccacagaaacacctcgataaat
tttaacaaaggaataacttcaataattggccaaaatggaagtggaaaatcgtcaatattt
caggcaatgaattttgcactttttgctccgcgtggaaacaattttaggattgaaaattta
atgcaacagggctctgcatctttttctgtagaattggaatttgaaatgatgggaaatata
tatcttgtaaaaagaaaaaggtttcaaaataaaacagatgacaaactatacgttaacggg
aaattaaatgctgaatctgcatcggaaataaacaaaaaaatagaagagattttagaaata
gataacagcgtattttcaaatgcaatatacataaaacagggcgaaattgcaaatttaatc
cagatgactccgagagatcgaaaagaagttatcggaaagcttcttggaattgaaaagtac
gaaaaagcctctgaaaaaatgaatattgtaaaaaaaagctacgaagaaatgctttttaaa
cttgaaggggagctcgtccaagaacctgaaattttagaaaatcttgaaaaattaaaaaat
gaagtttctgaatctgaaattttaaaagaagaaattttgaaaaaatatgaaaatcttgaa
aaattaaaacttgaaaaaaattcagaattaatttcaatggaagaaaaatttgctgaaaat
aacctgttgaaagaaaatttaaaggatattatttcagaaatcaaaaatataaatttagaa
attcagaatcttgaaaactcattaagttcagtagttgaagaatcggaaaatttatttaaa
aacgaagaaatttacaaaaaatacttagaacttgaattaacgattaaagaactaaatact
aaattaataagtcataaatcagactacgaatcttacaataaattaaaaacaattgtagaa
tctttaataaacgaattaaatatcttaaaagaatcgttaaaggataataaaaaaaatcct
gatgaattaaaggaaaatttaaacgaaattgataaaaaaattcagaaattggacggtgta
aaagaaaaaataacagaacttaattttattgaaaaacaaatttctggaataaacgatcac
aaaaaaacggtagaaacacattttgattcttcaaaactttacgaagatctgattaaaact
tttgacggcctaaagactaaaaaaaatagttatgaaaatcttttaaaggaaaaaaatgat
cttgaaaaaaaacttcaaagtgctattgaagaaaaaatcaaattaatttctgaattaact
gtttttgaaaaaatagaagaaaaaataaatcttgaaaatgaattaaaagaaaaatatgaa
ggtttatctgaaaaaatagataaattaaatgaaataatcacaaaaaaagaaagtaaaatc
ttagaaactaaaaattataagctggaacttgaaaaaaccaaagattcgtgtcacgtctgc
cagtccaaaataactgaagaaaaaaaacaggaattactcaaaaaatatacctctctaatt
caaaatgaaggtttatcaattgaaagtatcaaaaaacagcttgaagttatattaaacaaa
aaagagcagcttaaactcaaattgaatgaaattgattcatttaaatcaaaatacggggaa
ttaaaagaaaaaaagaattaccttttgaaagttgaagagtcgataattgaaaatactcaa
aaattaaacgaattaactgaacaactcaacgaatattcttccttaaacgatgaaataaag
ttaattgaaaataaattaaacgatttagaagaaatttacaaaaaatatacatattccgtt
caatttttgactaaaaatgatgaatctgaaattttaaataaaaaatctgaaattttaaaa
attatcggagactatgattatttaaaaattaaaaatgagaaagaatccctcgaaaattta
aaagatgaattaaaaataattatttctaatttagaacgagaaaataagctaaaatcagaa
ttaaaagatattcaagataacatgtcttcaaaaataggaattgttgaatgttacattaaa
tgggaaactgaaaaatcagcttttgaaactaaaatatcagaatataaagaaaattacgaa
aaatatatggaaagtttagcagttcttaaaaaccattccaaaatatattctgtagaaata
aatgaattaaatgagtttttaaaccagaaacttgctgaaaaacagaatatatctaaaaaa
ctcttagaaaatagaataaatactgaaaaaaatatacaaattgtaaattacagtccagaa
gtgcatgaaaacgctaaaaaagcttatgaatccataatcaataaatttaatgatatatcc
ataactttagaacgaataaattttgaattaaaacttaaaaatgaaaatatagtttatttg
aatgaaaaaatccaaaacttggcgaataaaaaagaagaaagaaggaaaattgaagaattt
aaagagtatctcgataaaataaaaagggaaatattctcaaaagatggttttcaaaagtat
ttaagagaaaagtatattccgttaattcaaaggcatacaaaccagatttttcaggaattt
gaacttccatattcccatattcaattaaaagatgactacagcttgatagtcgatggcctt
ccagttgaaacattgagtggtggagaacagattgcagtttccctcgcattaaggcttgga
atatctaaagcagtttgtaacaatattgaatgcatcatattagatgaaccaacagcgtat
ctcgacgaagataggcgtaaaaaccttttaaatatattcaaaaacataaaaacaataaac
cagatggcgataattacgcaccatcaggaactcgaacagattgcagataacattgtaaaa
gttagaaaaatcggcgaaaattcaaaagtatctttagaatag
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