KEGG   Methanococcus maripaludis C5: MmarC5_0280
Entry
MmarC5_0280       CDS       T00491                                 
Name
(GenBank) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mmq  Methanococcus maripaludis C5
Pathway
mmq03030  DNA replication
mmq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MmarC5_0280
   03410 Base excision repair
    MmarC5_0280
   03450 Non-homologous end-joining
    MmarC5_0280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmq03032]
    MmarC5_0280
   03400 DNA repair and recombination proteins [BR:mmq03400]
    MmarC5_0280
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmq04147]
    MmarC5_0280
DNA replication proteins [BR:mmq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MmarC5_0280
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MmarC5_0280
DNA repair and recombination proteins [BR:mmq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MmarC5_0280
Exosome [BR:mmq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MmarC5_0280
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc XPG_I_2
Other DBs
NCBI-ProteinID: ABO34596
UniProt: A4FWM1
LinkDB
Position
241572..242546
AA seq 324 aa
MGVQFGDLIPKTEISLKFLKNKTVAIDAMNVIYQFLSSIRLRDGSPLKNKNGEITSTYNG
IFYKTIYMLENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQKY
AKRANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDYDSILYG
AENVVKNITSSNKDIELIELEKTLSELNVSLDQLIDVAILIGTDYNPGGLKGFGPKKAID
TVKKGKMENYISEIENYSEIRKIFDEPNVTSEYDTKLKTPKKEELAEFLIEENDFSKDRI
LPNIEKISNLLGNKKSQKSLEAWF
NT seq 975 nt   +upstreamnt  +downstreamnt
atgggagttcaatttggagatttgatacccaaaacggaaatctctttaaaatttttaaag
aataaaactgttgcaatagatgcgatgaacgtaatttaccagtttttatcaagcattcgt
ttaagggatggaagtcctttaaaaaataagaatggagaaattacttcaacttacaacggt
attttttataagacaatttacatgctagaaaatgaaatgaccccaatatgggtttttgat
ggtaaatctcacgatttaaaagaaaaaacaaaagaagaaagaaggaaatcccgaaatggt
gcactcgatagttatttggaagcaaaagagcagaataacttggaagaaatgcaaaaatat
gctaaaagagcaaattttttggataaaaaaacaatagataattccaaaaaactccttgag
ttgatgggaattccatacatcaatgctccatcagaaggagaagcacagtgtgcagaactt
gtaaaatcaaacgatgcattttgtgtgataagtcaggattacgattcaatcctttatggt
gcagaaaatgttgtaaaaaacataacttcatcaaataaagacattgaattgatagaactg
gaaaaaactttatctgaactgaacgtttctcttgatcagcttattgatgttgcaatattg
attggaactgattacaatcctggtgggttgaaaggattcggtccaaaaaaagcaattgat
accgttaagaaaggtaaaatggaaaattatatatccgaaattgaaaattattctgaaatt
agaaaaatatttgatgaacctaatgtaacatcagaatacgatacaaaattgaaaacccct
aaaaaagaggagctggcagaatttttgatcgaagaaaatgatttttcaaaagatcgaatt
ttaccaaacattgaaaaaattagcaatcttttgggcaataaaaaatcccagaaaagtctt
gaagcctggttttag

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