Methanococcus maripaludis C5: MmarC5_0855
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Entry
MmarC5_0855 CDS
T00491
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mmq
Methanococcus maripaludis C5
Pathway
mmq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MmarC5_0855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmq03400
]
MmarC5_0855
DNA repair and recombination proteins [BR:
mmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MmarC5_0855
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MmarC5_0855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
P-loop_SecA
AAA_30
ACDC
UB2H
TrwB_AAD_bind
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABO35163
UniProt:
A4FY79
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All DBs
Position
831963..833903
Genome browser
AA seq
646 aa
AA seq
DB search
MNSPNFKLKADFEPKGSQPEAIAELVNELEKNPEKSKQTLLGVTGSGKTFTIANVIEKVQ
KPTLVIAHNKTLAAQLYNEFKEFFPENRVEYFVSYYDYYQPESYIPQRDQYIEKDAQINP
KIEQMRLRATSAILSRRDVIIVASVSCIYGLGNPELFKEMGFELKVGEKIKRSDIIEKLV
DIQYERNDMELVPGRFRVKGDTLDIIPGYQDDILRVEMFGDEIDRMYELDPKNMTKKHEL
DSFYMYPAKHFVIPEEDKKNAITSILKELDEWLPHLDMLKSHRLKQKTLYDIEMIEETGS
CKGIENYSRHFENRKEGEPAYCLLDYFPDDFLIVIDESHQTIPQIRGMYKGDRSRKQSLI
DYGFRLPSAYDNRPLRFEEFKKYMNNVIFVSATPGDYELDKSNQVVEQIIRPTGLLDPEV
EIRPIENQVEDIIKETEKMVEKGERVLITTLTKRLAEELTEYLAKRNVKARYLHSDIDTI
ERTEIIRNLRLGKFDCLVGINLLREGLDIPEVGFVGILDADKEGFLRNDKSLIQTIGRAA
RNANSKVVLYANKMTDSIKKAVFETERRRNLQKEYNEKHNIAPKTIVKPIREKVVDISDV
KHIPVADIPNVVIELEAEMYEAAEALEFEKAIKIRDTIAKLKKKIK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaaatttcaaattaaaagcagattttgagccaaaaggatcccaaccagaa
gcaattgcagagcttgtaaatgagcttgaaaaaaatcctgaaaaaagtaagcagactctg
ctcggtgttacaggttctggaaaaacttttactattgcaaatgtgattgaaaaagttcaa
aaaccaacactggtaattgcgcacaataaaacacttgcggcacaactttataatgagttt
aaagagttctttcctgaaaatcgagtagaatactttgtttcatactatgattactaccag
ccagaatcatatattccacaaagagatcaatatattgaaaaggatgcacaaatcaacccg
aaaattgagcaaatgcgtcttcgtgcaacttctgcaattctttcgagaagggacgtgata
attgtagcatcggtttcctgtatatacggtcttggaaatcctgaactctttaaagaaatg
ggttttgagctaaaagtcggagaaaaaatcaaaagatccgacattattgaaaaattggtg
gatattcaatacgaaagaaacgatatggaattagttccgggaagattcagggtaaaagga
gatactttggatattattccaggatatcaggacgatattttaagagttgaaatgtttggg
gatgaaattgatagaatgtatgaattggatccaaaaaacatgaccaaaaaacatgaactg
gattcattttatatgtaccctgcaaaacacttcgtaattcctgaagaagataagaaaaat
gcgataacatccattttaaaagaactcgatgaatggcttccacatttagacatgttaaaa
tctcacagattaaagcagaaaaccctgtatgatattgaaatgatcgaagaaactggaagc
tgtaagggaattgaaaattattcgagacattttgaaaatagaaaagaaggagagcctgca
tactgtcttttagactatttcccagatgattttttgatcgtaattgatgaaagccatcaa
accatccctcaaattcgcggaatgtacaagggcgacagatcaagaaaacagtcattaatt
gattatggattcagattgccaagtgcatatgacaaccgaccccttagatttgaagaattt
aaaaaatacatgaacaatgtaatttttgtgtcagctacccctggggactacgagttagat
aaatctaaccaggttgtggaacagattattagaccaacaggattacttgaccctgaagtt
gaaataaggccgattgaaaatcaggttgaagatatcataaaagaaaccgaaaaaatggtc
gaaaaaggagaaagagtattaattacgactcttacaaaacgtcttgcggaggaattaact
gaatatcttgcaaaacgaaatgttaaagcaagatatctgcattctgacatagatactatt
gagagaaccgaaattattcgaaatttaaggcttggaaaattcgactgcctcgttggaata
aatttgttgagggagggtttagacattcccgaagttgggttcgttggaatactcgatgct
gacaaggaagggtttttgagaaacgataaaagcttgattcaaacaatcggtcgtgctgca
agaaatgcaaattcgaaagtcgtgctttatgctaacaaaatgaccgattcaattaaaaaa
gcagttttcgaaactgaaagaagaagaaacttgcaaaaagaatataatgaaaaacacaat
atcgcaccaaaaaccattgtaaaaccaataagagaaaaggtagttgatatttctgatgta
aaacatatacctgtagcagatattccaaatgtcgtcatagaacttgaagctgaaatgtat
gaagccgcagaagcgctcgaatttgaaaaagcaataaaaataagagatacaattgcaaaa
ttgaagaaaaaaattaaataa
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