Methanococcus maripaludis C5: MmarC5_1182
Help
Entry
MmarC5_1182 CDS
T00491
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmq
Methanococcus maripaludis C5
Pathway
mmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmarC5_1182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmq03019
]
MmarC5_1182
03009 Ribosome biogenesis [BR:
mmq03009
]
MmarC5_1182
Enzymes [BR:
mmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MmarC5_1182
Messenger RNA biogenesis [BR:
mmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MmarC5_1182
Ribosome biogenesis [BR:
mmq03009
]
Prokaryotic type
rRNA helicases
MmarC5_1182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
AAA_30
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABO35480
UniProt:
A4FZ46
LinkDB
All DBs
Position
complement(1132316..1133941)
Genome browser
AA seq
541 aa
AA seq
DB search
MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP
ILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRR
GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRML
LFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDLEK
EFYGLIFCKTKADVDEVSSRLNEKGYAAEGLHGDMTQAQREKTLDKFKGRKINVLVATDV
AARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYIQKIA
KTEIRKEEVPDVKDIIGAKKRKIVSGIKEVLESGKYNDCENMAADLLEDADPQEVLSAVL
KYALKDELSESNYKKIGRNSQRSEGRDRSGRSEGRGRRSFVAGGNVRLFVALGKLDKMNP
KKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSDDAERILDSFKHEKRGRRAIVEVASG
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttaaaaatttaggtctatctgacgagatattggaagctttagaaaagaaa
ggcttcacaacccctactcctatccaagaacaagcaattcctattttaattgaaggaaaa
agagacattgtcggccaagctcaaacgggaactggaaaaaccgcagcatttggtatccct
attctagaaacaattgacgaaagttcaagaaacacacaagcacttattttagcacctaca
agagaacttgcaatacaagttgcagaagaaatcgattcaatcaaaggttcaaaaagattg
aacgttttcccagtatatggtggacagtcaattgacagacaaataagagaattaagaaga
ggagttcagattgttgttggaactccaggaaggatcctcgaccacatctcaagaagaaca
ataaaactcgaaaacgtttcatacgtagttttggatgaagctgatgaaatgttaaacatg
ggattcattgacgatgtagaagaaatcttaaaatcagtaagcactgaaaaaagaatgctt
ttattctcagcaacacttcctgacagcattatgaaacttgctaaaaactacatgagagaa
tacgatatcatcaaagttaaaagacaacagcttacaacaaccttaactgaccagtctttc
tacgaaattcactcaagagataaatttgagttactttcaagaattatcgacttagaaaaa
gagttctacggtttaatcttctgtaaaacaaaagcagacgttgacgaagtttcaagcaga
ttaaatgaaaaaggatacgctgcagaaggtcttcacggagatatgacccaagcacaaagg
gaaaaaactcttgataaatttaaaggaagaaaaatcaacgttctcgtagcaactgatgtt
gcagcaagaggaatcgatatcaacgacttaacacacgttgtaaactatgatattccacaa
aaccctgaatcatacgttcacagaattggaagaacaggaagagctggaaaacaaggttac
gcagttacatttgtagaaccttcagaattcagaaaattcaaatacatccagaaaattgca
aaaactgaaattagaaaagaagaagttccagacgttaaagacatcattggggctaagaaa
agaaaaattgtttcaggaataaaagaagttttagaatctggaaaatacaacgactgcgaa
aacatggctgctgatttattagaagatgcagatccacaagaagttctttcagcagtttta
aaatacgcattgaaagatgaattaagcgaatcaaactacaaaaagattggaagaaattca
caaagatctgaaggaagagacagaagtggaagaagcgaaggtaggggaagaagatcattc
gttgctggcggaaacgttaggttattcgtagctttaggtaaactcgacaaaatgaaccct
aaaaaattagttgaccacatctcaagaaaatccgatgttaaagggagagacatcgacgat
gtaaaagtatttgagaagttttcatttgtaaccgtatcctcagacgatgcagaaagaatt
ctcgattcattcaagcatgaaaaaagaggaagaagagcaatagttgaagttgcgagcggc
aactaa
DBGET
integrated database retrieval system
