KEGG   Methanococcus maripaludis C5: MmarC5_1352
Entry
MmarC5_1352       CDS       T00491                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mmq  Methanococcus maripaludis C5
Pathway
mmq03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mmq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MmarC5_1352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmq03032]
    MmarC5_1352
DNA replication proteins [BR:mmq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MmarC5_1352
SSDB
Motif
Pfam: AAA Rad17 RCF1-5-like_lid DUF815 RuvB_N AAA_14 AAA_22 nSTAND3 AAA_33 AAA_assoc_2 AAA_17 IstB_IS21 TIP49 NACHT NB-ARC AAA_16 AAA_18 Zeta_toxin ATPase_2 AAA_30 DEAD ResIII NPHP3_N Mg_chelatase AAA_5 AAA_28 ABC_tran AAA_24 Sigma54_activ_2 AAA_25 RNA_helicase Parvo_NS1 AAA_7 TsaE NTPase_1 SRPRB AAA_19 AAA_29 RFC1 DnaB_C Sigma54_activat RsgA_GTPase Viral_helicase1 ADK AAA_11 Cdc6_lid UBA_Rad5
Other DBs
NCBI-ProteinID: ABO35650
UniProt: A4FZL6
LinkDB
Position
complement(1299047..1300501)
AA seq 484 aa
MEEWVEKYRPKSLNDVAGHNKTKQALINWIESFVNGQKQKPILLAGPPGSGKTTLAHAIA
KDYAFDVIELNASDKRNKDVIAQVVGTAATSKSLTGKRTLIVLDEVDGLSGNDDRGGVAE
IIKVLKTAENPVILTANDVYKPALMTLRNNVNLINVGSVHTNSIPPVLRKIALKEGFEID
EKVIKTIASHSGGDLRAAINDLQSLATGGSLEVEDAKELPDRDSEKSIFDAMRIIMKTTH
YDIATSATRDVKEDLGTIQEWISENLPKEYLRYKDLAGGYDYLSKSDVFLGRVFKRQYFG
LWRYASALMTAGTALAKEEKYRGFTRYGPPTIFTKLSRTKGSRQKMKDILKKIALKTHTS
TKRARNTLDYLVVIFESNPEVSAELVEYYELTKLEMEFLTNKTIAKNIFSVIAGKKPKVK
TETPKKKEKTKEAMPIIPKRPRISEPPEPLKEVITTIEKSVEKADTKEKEKKDPKKQATL
DSFF
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggaagagtgggttgagaaatacaggccaaaatcgttaaatgacgttgcaggacacaat
aaaactaaacaggcccttattaattggatagaatcatttgtaaatggtcaaaaacaaaaa
ccaatacttttggcgggacctcctggttcaggaaaaactaccctagctcatgcaatcgca
aaagactatgcatttgatgtaatcgaacttaatgcaagtgacaagcgaaataaagatgta
attgcgcaagttgtgggaactgcggcaacttcaaaatcacttaccggaaagaggacttta
atcgttttagatgaggtagacgggctttctggaaatgatgatcggggcggggtagctgaa
ataataaaagttttaaaaacagcagaaaacccggtaattttaactgcaaacgatgtatac
aagcctgctttgatgacacttagaaataatgtaaatttaattaatgttggttcagtccat
acaaactcaattcctccggttttaagaaaaattgcattaaaagagggcttcgaaatagac
gaaaaagtaatcaaaacgattgctagccactctggtggagatttaagggctgcaataaat
gatttacaatcattggcaacgggcggatccctcgaagtcgaagatgcaaaagaactccct
gatagggacagtgaaaagagtatttttgatgcaatgagaataataatgaaaacaacccac
tacgacattgcaacaagtgctacaagggatgtaaaagaagatctaggaactattcaagaa
tggatctctgaaaatttaccaaaagaatatttaagatacaaagatcttgcaggcggatat
gattacctctcaaaatcagatgtatttttgggaagggtatttaaaagacagtattttggg
ctttggagatacgcttcagcgctgatgactgccggaaccgctcttgcaaaagaagagaag
tatcgcggatttactaggtatggccctccaactatctttacaaagctcagcagaactaaa
ggtagccggcaaaaaatgaaagatattttgaaaaaaatagctttaaaaactcatacttca
acaaaaagggcaagaaataccctggattatttagttgtgatttttgaatcaaatccggaa
gtttctgcagaacttgtggaatattatgaacttacaaaactagaaatggagtttttgact
aacaaaacaattgcaaagaatatattttcagtaattgctgggaaaaaaccgaaagttaaa
acggaaactccaaagaaaaaggaaaaaacaaaagaagcaatgccaatcattccaaaacgg
ccaagaatttcagaacctccagaacctttaaaagaagtaatcacaaccatcgaaaaatct
gtagaaaaagcagataccaaagaaaaagagaaaaaagatccaaagaaacaggcgactttg
gacagtttcttttaa

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