Methanococcus maripaludis C5: MmarC5_1416
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Entry
MmarC5_1416 CDS
T00491
Name
(GenBank) TATA binding protein of transcription factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmq
Methanococcus maripaludis C5
Pathway
mmq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MmarC5_1416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmq03000
]
MmarC5_1416
03021 Transcription machinery [BR:
mmq03021
]
MmarC5_1416
Transcription factors [BR:
mmq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MmarC5_1416
Transcription machinery [BR:
mmq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MmarC5_1416
RNA polymerase III system
TFIIIB
MmarC5_1416
RNA polymerase I system
SL1/TIF-1B
MmarC5_1416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF7854
Metaviral_G
Motif
Other DBs
NCBI-ProteinID:
ABO35714
UniProt:
A4FZT0
LinkDB
All DBs
Position
1357294..1357839
Genome browser
AA seq
181 aa
AA seq
DB search
MEPEIKIVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK
LNCTGAKCKEDAVIAINKITKELKEAGMDLIDNPEVNVQNMVATTELGMEPNLDDISTLE
CTEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYRAYEKISKTLKELEEEL
Y
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtggaacctgaaatcaaaatcgtaaacgtagttgtatcgacacagatcggaacagatatt
gacttagaatatgccgcagatatattagataacgcagaatatgaaccagaacagtttccc
ggactggtttgcagattaagcgacccaaaagttgcacttttgatatttagaagtggtaaa
ttaaattgtaccggtgcaaaatgcaaagaagatgcagtaattgcaataaacaaaataact
aaagaattgaaagaagcaggaatggatctcatcgacaatcctgaagtaaacgtacaaaac
atggttgctacaaccgaacttggaatggaacctaatttagatgatatatccaccttagaa
tgcacagaatatgaaccagaacagtttccaggattagtttacagattaagcgacccaaaa
gttgttgtattaatattcggtagtggaaaagttgtaattactggattaaaagtaatcgaa
gatgcatacagagcatatgagaaaatatctaaaacattgaaagaactcgaagaagaatta
tactaa
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