Methanococcus maripaludis C5: MmarC5_1499
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Entry
MmarC5_1499 CDS
T00491
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmq
Methanococcus maripaludis C5
Pathway
mmq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MmarC5_1499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmq03019
]
MmarC5_1499
03009 Ribosome biogenesis [BR:
mmq03009
]
MmarC5_1499
04131 Membrane trafficking [BR:
mmq04131
]
MmarC5_1499
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmq04147
]
MmarC5_1499
Messenger RNA biogenesis [BR:
mmq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MmarC5_1499
Ribosome biogenesis [BR:
mmq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MmarC5_1499
Membrane trafficking [BR:
mmq04131
]
SNARE
SNARE associated proteins
Others
MmarC5_1499
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MmarC5_1499
Exosome [BR:
mmq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MmarC5_1499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_2
AAA_14
AAA_5
AAA_22
AAA_33
nSTAND3
AAA_28
AAA_18
IstB_IS21
DUF815
Mg_chelatase
ABC_tran
RNA_helicase
AAA_7
Sigma54_activat
Zeta_toxin
AAA_17
NPHP3_N
ATPase
AAA_3
Vps4_C
TsaE
AAA_24
PhoH
Sigma54_activ_2
ATP-synt_ab
AAA_30
Parvo_NS1
SLFN-g3_helicase
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
ABO35796
UniProt:
A4G012
LinkDB
All DBs
Position
1441332..1443686
Genome browser
AA seq
784 aa
AA seq
DB search
MVDLVVAEAYQGDVGKGIVRIDPLTMEKLSIKAGDAIEIAGKEKTYATVWRGYLEDQGKG
IIRMDGILRQNTKAGIGDKVKITVVEVKEAKKVTLAPMQAVRFSTGFESYVGSRLVDQVV
DKGSKVVIGVLGTAFPFIVTGTTPKGPVKINEYTQIELKTEPVTELKETKVPNVTYEDIG
GLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFY
TINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASGEVERRMVAQ
LLTLLDGLEGRGQVVILAATNRPDSIDMALRRPGRLDRELTIGIPDRHARKEILQIHTRN
MPLQPDYEKNEVIPVLNELIGEFERTKIENTVKLVEKASSEAEIEKILKDEDIEDKVKSK
LNQIMVKELADKTHGFAGADLAALSKEAAMKTLRRLLPDIDLEKEEIPREVLDKIKVTKD
DFVGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNREMFERMGIRP
PKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAA
PTVIFFDEIDSIAPKRGMSFGGSGVSEKVVNQLLTELDGLEEPKDVVIIAATNRPNLLDP
ALLRPGRLDRIVLVTVPDENARFEIFKVHTKGMPIGKDVNLQKLAKETNGYTGADIEALC
RESAMIALRENVNSEHVELKHFEAAFKRIAPSVKDEDMDEYRDLAKEYGRTTGVSEIETP
EETK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtagacttagtagttgcagaagcctatcagggagatgtaggtaagggaattgtaaga
attgatccattaacaatggagaaattatcaataaaagccggagatgcaatagaaattgca
gggaaggaaaaaacctacgcaaccgtttggagagggtaccttgaagaccagggtaaaggt
atcataagaatggacggtattttaagacaaaatactaaagcaggtattggggataaggta
aaaattaccgtagtggaagtaaaagaagctaaaaaggtaacactagctccaatgcaggct
gtaagattcagcacaggatttgaaagctatgttggaagcaggcttgtagatcaggttgtc
gataaaggatccaaagtagtaattggagttttgggaactgcatttccatttatcgtaaca
ggaactactccaaaaggacctgtaaaaattaacgaatatactcaaattgagttaaaaact
gaaccggttacagaattaaaagaaaccaaagttccaaatgtaacctatgaagacattggt
ggtttaaaagaagaagtcaaaaaaatcagggaaatggttgaacttccaatgagatacccg
gaattatttgataaacttggtatcgaacctccaaaaggagttttacttgcaggacctcca
ggaactggtaaaacattgcttgcaaaagctgttgcaaacgaagcaggtgctaatttctac
accattaacggccctgaaataatgagtaaatacgtcggtgaaaccgaagaaaatttaaga
aaaatatttgaagaagctgaagaaaactcgccttcaatcatattcattgacgaaatcgac
gcagtagctccaaaaagggatgaagctagcggtgaagttgaaagaagaatggttgcacag
cttttgacattgcttgacggtttagaaggtaggggccaggttgtaattcttgcagctaca
aacaggccggattcaattgatatggctttaagaagacctggaagactagatcgggaatta
acaattggaattcccgataggcatgcgagaaaagaaattttacagatccatacaagaaac
atgcctcttcagccagattacgagaaaaatgaagtaattcctgtattaaatgaacttatc
ggggaatttgaaagaactaagatcgaaaatacagttaaattggttgaaaaagcgtcttca
gaagcagaaattgaaaaaatactcaaagatgaagacatagaagataaagtaaaatcaaaa
ttaaaccagatcatggtaaaagaacttgcagacaaaactcacggatttgcaggtgctgac
ttagctgctctttcaaaagaagctgctatgaaaaccttgagaagattactccccgatatc
gaccttgaaaaagaagaaattcctagagaagtactcgataaaattaaagtaactaaagat
gactttgtaggtggtttaaaagaagtagagccatctgctcttagagaagtgttggtagaa
gttccaaatatcaaatggagtgatgttggaggacttgaagacattaaacaggacttaaaa
gaagctgttgaatggccaattaaaaacagggaaatgtttgaaagaatgggaataaggcct
ccaaaaggagtattactcttcggtccccctggaactggtaaaacactccttgcaaaagct
gttgcaaacgaaagtgaagcaaatttcataagcgtaaaaggtcctgaaatattcagcaaa
tgggttggagaaagcgaaaaagcaatccgtgaaatatttagaaaagcaagacaggctgca
ccaacagtcattttctttgatgaaattgactcaatagctccaaaaagaggaatgagcttt
gggggtagcggggttagcgaaaaagtggtaaaccagcttttaactgaactcgatggtctt
gaagaacctaaagacgttgtaattattgctgcgacaaataggccgaacttattagatcct
gcacttttaaggccaggaagactcgacaggatcgttttggtaacagttcctgacgaaaat
gcaagatttgaaatattcaaagttcacaccaaaggaatgcctattggaaaagacgtgaat
ctccaaaaacttgcaaaagaaactaatggatacactggtgcagacatcgaagcactttgt
agggaatctgcgatgatcgcactaagagaaaacgtcaattcagagcatgttgaattaaaa
cactttgaagccgcgttcaaaagaattgctccttcggtaaaagatgaagacatggatgaa
tacagagaccttgcaaaagaatacggaagaactactggagtatccgaaattgaaactcct
gaagaaaccaaataa
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