Methanococcus maripaludis C5: MmarC5_1644
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Entry
MmarC5_1644 CDS
T00491
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mmq
Methanococcus maripaludis C5
Pathway
mmq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MmarC5_1644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmq03021
]
MmarC5_1644
Transcription machinery [BR:
mmq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MmarC5_1644
Prokaryotic type
Archaeal type
TFE
MmarC5_1644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HypA
Zn_Ribbon_TF
HTH_9
DnaD_N
TrmB
HTH_Cmi2_C
HTH_34
HTH_IclR
OapC
DUF7129
HTH_20
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ABO35941
UniProt:
A4G0F7
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All DBs
Position
complement(1581383..1581940)
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AA seq
185 aa
AA seq
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MNLSKDEIFTMLENPLIQQVLFEIMDEDVVGFDVLSVLINTNEVTDDEISRQLDVKLNNI
RRILYKLYEARLVDYNREKDEETNWYTYTWKPSLEKVPALVAKKMKNVLNGLKEQLEMEE
TNMFFFCSDCEIKFTFEDAMDSGFRCPQCGGMMYEYDNKKDISLLKEQINYLEDEFTKNP
LFSAY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcaaaagatgagatatttacaatgctcgaaaacccactaatacaacaggta
cttttcgaaataatggatgaagatgttgttggttttgacgtgttgtcagtattaatcaat
actaatgaagtaactgatgatgaaatttcaagacagttagacgtaaaattaaacaacatt
agaagaatactttacaaattatatgaggcaaggcttgtagattacaatagggaaaaagat
gaagagacaaactggtatacatacacatggaaaccatccctcgaaaaagttcctgcatta
gttgctaaaaagatgaaaaacgtactcaatggtttaaaagaacagcttgaaatggaagag
acaaacatgtttttcttctgttctgattgtgagattaaatttacatttgaagatgcaatg
gacagtggatttagatgcccacaatgtggtggaatgatgtacgagtatgataataaaaaa
gatatttcactattaaaagagcaaattaattatttagaggacgaatttactaaaaatcct
ctcttttctgcatattaa
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