Maricaulis maris: Mmar10_0086
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Entry
Mmar10_0086 CDS
T00394
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mmr
Maricaulis maris
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmr03400
]
Mmar10_0086
Enzymes [BR:
mmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmar10_0086
DNA repair and recombination proteins [BR:
mmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mmar10_0086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_12
DEAD
DUF3638
Rap1_C_Sp
Motif
Other DBs
NCBI-ProteinID:
ABI64382
UniProt:
Q0ATK5
LinkDB
All DBs
Position
87416..90967
Genome browser
AA seq
1183 aa
AA seq
DB search
MSEARFDPDILKSASADQQRAARPEASVFVEANAGSGKTRVLVDRVINLLLAGHKPETIL
CVTYTKAAAAEMKERLFKRLGDWSVTPDEVLAVELKALLDRDLKPGDANRARKLFAQALE
TPGGLKIQTIHAFCEGLLRRFPLEAGAPPGFDTLDDISAGKAMDAARRAVLSGLAPEAVN
TLIETGGPDAINTILRWARSNRHDFAETCERAGGCDGLIAQLWAVLELPEGSHAAALKQD
AMAAMPRTEVEAASHALIHEGAKTDVTRGETIRVALAAGDPAQAFDAYLAAFYTKGGTGT
RAASLATKTISDRFPHVLSLLEAEADRLDALRDMIKRADIARASAVALRIVDDFTRAYSE
ALEQARALDFDDLIRLAGLLLAPENPFSGWVGYKLDGQLAHALIDEAQDTAPRQWDMIRG
LTAEFFAGAGAQETGRTLFVVGDEKQSIYSFQGAEPARFIEEGDRIAASAAAVELPFERP
GLDVSFRSAPEILTAVDQAFEAKRPALEMKFVAGATDLPFARYQGHRAARSHTPGCVEIW
PAIPKPEKTEEGSIFDPVDLRARGSSRDVLAQTVAGEIADMISRGDAVWEEKGGQFTQRP
VRPSDIAILVWRRTGGFFEEVIRQLKLAGVPVAGADRMVLRDQTAVKDMLALGRFAMTSG
DDLALAEVLRSPLFDPVDPAKAGIDEQALYDLARSRTDLKRRGTLWNALFTSEDPRFADA
RSALSALRDQADKSRLYDFFTGFLNARTPTGETRWARMFARLGEEARDPLQEFLARALQH
EREEGGALASFIARIEGEDVQIKREMSPDRDEVQVMTVHASKGLERPVIILPDTTRSPLT
GKTTPIFAQTDCGLLWSQRKDDDTDAVAALRQQSENRQLAEHGRLLYVALTRARDRLIVC
GWRQGQGHPGRIADDSWYTQLAEAWQGEEWMPFETPVSRLVEDAEPGLRFGPAPVALGAV
SEAGAGDTSLPAWARLAAPAEGGQILGAAPSSLLADADSEPAVLSPLADPGGHRFRRGDV
IHKLLQTLPDLPSDRREAAGQRFLAAQSDIAESDRAQILTETLGILDHPDFAPLFGPGSR
AEVALVGQAPGLPANMIIRGQVDRLVVTGDEVLIIDYKTNRPPPADVAAVAKVYLGQMAT
YRALLRAVHPGKSVRCALLWTDAARLMELPDAVLDTIFDTGAA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcccgtttcgatccggatatcctcaaatcggccagcgctgaccagcagcgt
gccgcccgtcccgaggccagtgtcttcgtcgaggccaatgccggttccggcaagacgcgg
gtgttggtcgaccgggtgatcaacctgctgctggctggccacaagccggaaaccatcctg
tgcgtgacctataccaaggccgccgccgccgagatgaaggagcgcctgttcaaacgtctc
ggtgactggtcagtgacgccggacgaggtcctggctgtcgagctcaaggcgctgctcgat
cgtgatctgaagccgggtgacgccaaccgggccagaaaactgttcgcccaggcgctggaa
acgccgggtggcctcaagatccagaccattcacgccttttgcgaaggattgctgcgccgc
tttccgctcgaggccggtgccccgcccggctttgacacgctggatgacatatcggccgga
aaggcgatggatgcggcgcgccgggctgtcctgtccggtctggcaccggaggccgtcaac
acgctgatcgagaccggcggccccgatgcgatcaacaccatcctgcgctgggcccggtcc
aaccgtcatgacttcgccgagacctgtgagcgggccgggggatgcgacgggttgatcgcg
cagttgtgggcggtgctggagctgcctgagggcagccatgccgcagcgctcaaacaggat
gccatggccgccatgccgcgcaccgaggtggaggccgcttcgcacgctctgatccatgaa
ggggcgaaaaccgatgtcacgcgcggtgagaccatccgtgtagcgttggcagcgggcgac
ccggcccaagccttcgatgcctatctggcggcgttctacaccaagggcggcacggggacg
cgggcggccagtctggccaccaagacaatctccgacaggtttccgcatgtcctgtccctg
ctggaggccgaggccgaccggctggatgcgctgagggacatgatcaagcgggccgatatt
gcgcgggcgagcgccgtggcgctgcgcattgtcgacgattttacgcgcgcctattccgaa
gctctggaacaggctcgcgcgctggattttgacgatttgatccggctggccggtctgttg
ttggcgccggaaaaccccttctccggctgggtcggctacaagcttgatggccagcttgcc
catgccctgatcgatgaggcccaggacaccgcgccgcgccagtgggacatgatccgcggg
ctgacggccgagtttttcgccggagccggcgcgcaggagacgggccggaccctgttcgtg
gttggcgacgagaaacagtcgatctattccttccagggtgccgaaccggcccgcttcatc
gaagagggcgaccggattgcggcctccgcggcagcggtggaattgccgtttgaacgcccg
ggactggatgtctccttccgctcggcgccggagattctcaccgcggtcgaccaggccttc
gaggccaagcggccggcgctggaaatgaagtttgtcgccggtgccactgatctgcccttc
gcgcgctatcagggccaccgggctgcgcggtcgcacacgccgggctgtgtcgagatttgg
cccgccatccccaagccggagaagaccgaagaaggctcgatcttcgacccggtcgatctg
cgggcacggggcagttcgcgcgatgtgctggcccagaccgtggccggtgagatcgccgac
atgatcagccgcggcgatgcggtctgggaggaaaagggcggacagtttacccagcgcccg
gtgagaccctcggatatcgccatcctggtctggcgccggacgggtggcttctttgaagag
gtgatccgtcagctcaagctggccggcgttccggtcgccggggcggaccggatggtgctg
cgcgaccagaccgcggtgaaggacatgctggcgctggggcgctttgccatgacctccggt
gatgatctggcgctggccgaggtcctgcgctcgccgctgttcgacccggtcgacccggca
aaggcggggatagacgagcaggcgctctatgacctcgcccgctcacgcaccgacctgaaa
cgccgcggcacgttgtggaatgcgctcttcaccagcgaagatccgcgcttcgccgacgcc
cgctctgccctgtcggccttgcgtgaccaggccgacaagtcgcgcctgtatgacttcttc
accggctttctcaatgcccggacgccgaccggtgagacgcgctgggcgcgcatgtttgcg
cgtctgggcgaggaggcgcgcgatccgctgcaggaattcctggcgcgggcgctgcagcac
gagcgtgaagagggcggcgccctggccagcttcatcgcccgcatcgagggcgaagacgtc
cagatcaagcgcgaaatgagcccggaccgcgacgaggtccaggtgatgacggtgcacgcc
tccaaggggttggagcgcccggtcatcatcctgccggacaccacgcgcagtccgctgacc
ggcaagaccacgccaatcttcgcgcagacggattgcggcctgttgtggtcgcagcgcaag
gatgacgataccgacgcagttgcagcgctccgccagcaatccgagaaccggcaattggcc
gaacatggccgcctgctctacgtcgcactgacccgggcacgagaccggttgatcgtctgt
ggttggcgtcaggggcagggccatccgggccggatcgccgacgacagctggtacactcag
ctggcagaagcctggcagggtgaggagtggatgcccttcgagacccctgtctcccgcctc
gttgaggacgcggagcctggcctgcgcttcggtccggcgccagtggcactcggtgcggtc
agcgaggcgggcgccggagacacgagcctccccgcctgggcccgcttggcggcgccggcc
gagggcggacagattttgggcgctgcgccgtccagcctgttggccgatgctgacagcgaa
ccggccgtcctgtcgccgctggctgacccgggcgggcatcgtttccgccgcggcgatgtg
atccacaagctgctgcagaccctgcccgacctgccatcggatcgccgcgaagctgccggt
cagcgttttctggccgcgcagtctgatatcgccgagtcggatagggcacagatcctgacc
gagactctgggcattctggatcatcccgacttcgcgccgctcttcggtccgggcagccgg
gccgaagtggccctggtcggtcaggcgcccggcctgcccgccaatatgatcatccgcggt
caggtcgaccggctggtcgtgaccggcgatgaagtgctgatcatcgactacaagaccaac
cggccgccaccggctgatgttgctgcagtggcgaaagtttatctcggccagatggcgact
taccgggctctccttcgggcagttcaccccggtaaatccgtgcgttgcgccctgctgtgg
accgatgcggcgcgattgatggagcttcccgacgcggttctcgacaccatcttcgacacg
ggcgcggcttga
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