Maricaulis maris: Mmar10_1281
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Entry
Mmar10_1281 CDS
T00394
Name
(GenBank) RNAse R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mmr
Maricaulis maris
Pathway
mmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmar10_1281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmr03019
]
Mmar10_1281
03016 Transfer RNA biogenesis [BR:
mmr03016
]
Mmar10_1281
Enzymes [BR:
mmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Mmar10_1281
Messenger RNA biogenesis [BR:
mmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mmar10_1281
Transfer RNA biogenesis [BR:
mmr03016
]
Prokaryotic type
tRNA degradation factors
Mmar10_1281
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
ABI65573
UniProt:
Q0AQ64
LinkDB
All DBs
Position
complement(1392059..1394323)
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AA seq
754 aa
AA seq
DB search
MAGKTEFDAGLTREAVIDAVREGGGEFGKRELARAMSLKGSDAKRALNDALAALTEDGTL
TRSNSKTYSLPGALPAVCVVQLIGRDNDGELLAEPVRPDRHAPMIRLAPGEGAGGKGTPA
IGIGDKALVRLALQEDGSYQARLIKKLGQSAHKLLCMLRKPQSGPFRLLPVDRRSRHELV
PAKGEAEKAHDGDLVLCEIAKERRHGLKTARIVEVVGDASAPGAGSLIALYSHGVPQGFS
ETEQREADEAPTARQGKREDLRALPLITIDPDDAKDHDDAVWAAPDDDPKNPGGWQVIVA
IADVAAYVTPGSALDRGAFKRGNSVYLPDRVVPMLPERLSNDLCSLREKEDRPCLAVRMV
FDKSGNKRSHTFMRGWMRSAAKLSYTQAQDAIDGRDGGPANALLDDVLKPLWGAYFAARE
ARGRREPLEIDAPERRVRVGEDGQVIGVETRQRFDAHKLVEEFMIQANVCAAETLEQKRT
PLIYRVHEPPSREKIDALSDFLPTVGMKWAKGNKVETGRFNQLLKQAKSSEHYETINVVV
LRSQSQAVYDTENEGHFGLNLQRYAHFTSPIRRYADLTVHRALIRALGLGDDGQSDEERS
RLTVIAEEITHAERRAMAAERDAVDRFIAAYLADKIGAEFAGRITGVTRFGCFVKLDETG
ADGLVPISRLGEERFEHDEKLHALVGLQTGSRYRLGMPVMVRIDEAQPVTGGLLLDMLTE
AEKGERPSGRRRPKSGGPPNGRRSGKPWKKGRRR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaagactgagtttgatgccggcctgacccgcgaggcggtcattgatgccgtc
cgcgagggtggtggcgagtttggaaagcgtgaactggcacgggcgatgtccctgaaaggc
agcgatgccaagcgggcgctcaatgacgctctcgccgccctgaccgaagatggcaccctg
acccgctccaacagcaagacctactcgcttcccggcgccctgccagcggtttgcgtcgta
cagctgatcggtcgtgacaatgacggcgagctgctggccgaaccagtccgcccggaccgc
cacgcgcccatgatccgcctggcccccggcgaaggcgccggcggcaagggcacgcccgcc
atcggcattggcgacaaggcgctggtccgtctcgccctgcaggaagatggcagctaccag
gcgcggctgatcaagaagctcggccagagcgcgcacaagctgttgtgcatgctgcgcaag
ccgcaatcgggacccttccgtctgctgccggtcgaccggcgctcgcgccatgagctggtg
ccggcgaagggcgaggctgaaaaggctcacgatggcgatctggtcctgtgcgagatcgcc
aaggaacgccggcatggcctgaagaccgcccggattgtcgaggtcgtcggcgatgccagc
gcgccaggcgccggcagcctgatcgcgctttattcgcatggggttccccagggattttcc
gagaccgagcagcgtgaggccgacgaggccccgacggcacggcagggcaagcgcgaagac
ctgcgcgccctgcccctgatcaccatcgaccctgacgacgccaaggaccatgacgacgcc
gtctgggccgcgcctgacgatgatcccaagaaccccggcggctggcaggtcatcgtcgcc
attgccgatgtggcggcctatgtgacacccggcagcgcgctcgatcgcggcgctttcaag
cgtggcaattcggtctatctgccggaccgcgtcgtgccgatgctgcccgaacgcctgtcc
aacgatctttgctcattgcgcgagaaggaggaccggccctgcctggcggtccggatggtg
ttcgacaagtccggcaacaagcgctcgcacactttcatgcgtggctggatgcgctcggcc
gccaagctctcctacacacaagcccaggacgccattgacggccgcgatggcggtccggcg
aatgcgctgctcgacgacgtgctcaaacccttgtggggcgcctatttcgccgcccgggaa
gcgcgtggtcgccgcgaaccgctggagatcgacgcaccggagcgccgggtccgtgtcggc
gaggatggtcaggtgatcggggtggaaacccgccagcgcttcgacgcccacaagctggtc
gaggagttcatgatccaggccaatgtctgcgccgcggaaacgctggagcagaaacgcacg
ccgctgatctatcgcgtccacgagccgccctcacgcgagaagatcgacgcgctgtccgac
ttcctgccgaccgtcggcatgaaatgggcgaaaggcaacaaggtcgagaccgggcgtttc
aatcagttgctcaagcaggccaagagctccgagcactatgaaaccatcaatgtggtggtc
ctgcgcagccagtcacaggcggtctatgacaccgagaacgaggggcatttcggcctgaac
ctgcagcgctatgcccatttcacctcgccgatccgacgctatgccgacctgaccgtgcac
cgggccctgatccgggcgctgggactcggcgatgacggccagagcgatgaggaacgcagc
cgcctgaccgtgatcgcggaagaaattacccatgcggaacgacgggccatggccgccgag
cgtgatgcggtcgaccgtttcattgccgcctatctggccgacaagatcggcgccgagttc
gccggccggatcaccggggtgacccggtttggctgcttcgtgaagctggacgagaccggc
gctgacgggctggtaccgatctcccggctgggcgaggagcgtttcgagcacgacgagaaa
ctccacgccctggtcggcctgcagaccggatcgcgctaccggctgggcatgccggtcatg
gtgcgcattgatgaggcccagccggtcaccggcggccttctgctcgacatgctgaccgag
gctgaaaaaggcgagcgtccgagcggtcgccggcgtcccaaatccggcggaccacccaat
ggtcgccgctccggcaagccgtggaagaaggggcgacgccggtga
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