Maricaulis maris: Mmar10_1290
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Entry
Mmar10_1290 CDS
T00394
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmr
Maricaulis maris
Pathway
mmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmar10_1290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmr03019
]
Mmar10_1290
03400 DNA repair and recombination proteins [BR:
mmr03400
]
Mmar10_1290
Enzymes [BR:
mmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmar10_1290
Messenger RNA biogenesis [BR:
mmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmar10_1290
DNA repair and recombination proteins [BR:
mmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mmar10_1290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABI65582
UniProt:
Q0AQ55
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All DBs
Position
1405131..1406981
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AA seq
616 aa
AA seq
DB search
MSRKTGARDRIDVMLQTRPEDMLRETFGFPGFRPGQSDIVDHILAGRPTLCVMPTGAGKS
ICYQLPALMLDGMTVVISPLTALMDDQVAALQANGVAAAAIHSGRDRVDNVETWRQVQSG
DVQLLYLSPERLMTPRMLAALEALDPAMFVVDEAHCISKWGASFRPEYEDLSKLCARFPS
ARLAAFTATADEATRQDIADKLFGQGGEIVVHGFDRPNLTLGVAAKASWKSQLLEFLDDR
RSESGIIYCLSRKSTEEVAGLLREEGFNALPYHAGLSPETRRENQERFMAEEAVVMVATI
AFGMGIDKPDIRYVFHLHMPGSMEAYYQEIGRAGRDGQPAETMMLFGLSDARMRRQFIDQ
DGEDGEHKRREHKRLDSLLAYCEATRCRRISLLAYFGETGRQACGNCDLCLDPPVLIDGS
LDAQKLFSAILRTGEMFGAAHVIDVLRGADTEKVRARGHDSLPTYGVGSDRPKPFWQGLI
RQSVAAGLIEIDIQGFGALKLAGEARAVLKGEQTFKIREISTKPPKSRRAPKSASVDPST
VDATLLAALKARRRELAAERNVPAYVVFSDATLIDMAQLRPTNLELMASVNGVGPKKLET
FGQIFLDVLQEHGGPN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaaaacaggggctcgtgatcggatcgatgtcatgctccaaacccgccctgaa
gacatgctgcgtgagacgttcggctttcctgggtttcgtccgggacagtcggatatcgtc
gaccacatccttgccggacgtccgacactgtgtgtgatgccgaccggggccggcaaatca
atctgctaccagcttccggcgctgatgctggacgggatgacggtcgtgatctcgccgctg
acagcgctgatggatgaccaggtcgccgcgctgcaggccaatggtgtcgccgccgccgcg
attcattccggtcgtgatcgcgtcgacaatgtcgagacctggcgccaggtccagtcgggt
gatgtgcaattgctctacctgtctccggaacgcttgatgacgccgcgcatgctggctgcg
ctggaagcgctggatccggccatgtttgtcgtcgacgaagcgcattgcatttccaaatgg
ggggcgagtttccgcccggaatatgaagacttgtcgaaattgtgcgcccgcttcccgtcg
gcgcggctggcggcctttaccgcgacagccgatgaggcgacgcgccaggacattgccgac
aagctgttcggtcaggggggcgagatcgtggtgcacggtttcgatcgcccgaatctcact
ctcggcgtcgccgccaaggcgtcgtggaaatcccagctgctggaattccttgatgaccgc
cgttccgagtccggcatcatctattgcctgtcacgcaaatcgaccgaagaggttgccggc
ttgttgcgcgaggaggggttcaacgccttgccttaccatgccggcctgtctcccgagacc
cggcgcgagaaccaggaacgcttcatggccgaggaagcggtcgtgatggtggcgaccatc
gccttcgggatgggcatcgacaagccggacatccgctacgtcttccatcttcacatgccc
ggttccatggaggcctattatcaggaaatcggtcgcgctggccgggatggccaacctgcg
gaaaccatgatgcttttcggcttgtccgatgcccgcatgcggcgccagttcatcgatcag
gatggtgaggatggcgagcacaaaaggcgcgagcacaagcggctcgacagcttgctggcc
tactgcgaagcgacccgttgtcgccgcatctcactgcttgcctacttcggcgaaaccggc
cggcaggcctgtggaaattgtgacctgtgtctcgacccgccggtgctgattgacggcagt
ctggacgcacaaaaactgttctcggccatcctcagaaccggggaaatgttcggcgccgcc
cacgtcatcgacgttctgcgcggtgccgacaccgagaaggttcgtgcccggggccatgat
agtcttccgacctatggggtcggctcagaccgtcccaaaccgttctggcagggtttgatc
cgacagagcgtggcggcgggtctgattgagatagatattcaggggtttggtgcgctcaag
ctggcgggtgaggcccgcgcggtcctgaaaggcgagcagactttcaagatccgtgagatc
agcaccaaaccgcccaagtcgcggcgcgctcccaagtcggcgagcgtagacccgtcgacc
gtggatgccacactgcttgcggcgttgaaggccaggcggcgcgaactggccgccgagcgt
aacgtgccggcctatgttgtcttttccgatgcgacactgatcgacatggcgcagctccga
ccgaccaatctggagctcatggcgtcagtcaacggggtcgggccgaagaagcttgagaca
ttcggacagattttcctcgacgtgctgcaggagcatggcggacccaattga
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